Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006155.1 Hibiscus syriacus cultivar Beakdansim tig00014626_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  94901

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11063--11117
23
2.4
23
93
0
92
27
16
16
40
1.89
12337--12370
18
1.9
18
94
5
61
35
29
17
17
1.93
13452--13481
10
2.9
10
95
5
51
70
0
30
0
0.88
16859--16899
19
2.2
18
87
12
57
7
9
29
53
1.60
35104--35145
21
2.0
21
85
4
57
38
16
16
28
1.91
35968--36012
18
2.6
18
89
3
65
44
0
4
51
1.21
39820--39892
18
3.9
18
85
7
110
27
31
21
19
1.97
39819--39893
38
2.0
38
94
0
132
26
30
22
20
1.98
39996--40050
21
2.7
20
80
11
58
36
18
3
41
1.68
40457--40598
63
2.2
64
87
1
196
24
20
21
33
1.97
51056--51142
35
2.5
34
83
12
106
56
9
8
26
1.58
51356--51397
21
2.0
21
95
0
75
14
30
19
35
1.91
53451--53496
18
2.6
17
86
10
65
60
2
4
32
1.28
59196--59275
33
2.4
34
78
16
94
12
15
22
50
1.77
59219--59279
24
2.6
24
92
2
97
9
13
22
54
1.68
59230--59270
14
3.3
13
78
21
52
7
14
24
53
1.66
60311--60371
16
3.8
16
100
0
122
6
13
24
55
1.61
60323--60375
10
6.1
10
68
31
50
7
11
22
58
1.57
65318--65417
30
3.3
30
100
0
200
37
3
23
37
1.70
68893--68956
32
2.0
32
100
0
128
40
15
18
25
1.90
73804--73877
33
2.2
32
83
6
87
44
20
14
20
1.86
73818--73910
33
2.8
33
77
7
82
43
21
13
21
1.87
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
74632--74701
20
3.5
20
100
0
140
30
35
15
18
1.92
74761--74809
19
2.6
19
84
9
57
24
28
20
26
1.99
77718--77761
19
2.3
19
88
0
61
38
4
2
54
1.33
77727--77765
19
2.1
19
90
4
62
33
2
0
64
1.08
77731--77887
79
2.0
80
89
1
244
27
10
8
54
1.62
78200--78253
28
1.9
28
96
0
99
29
9
25
35
1.87
87005--87035
14
2.1
15
94
5
55
70
9
0
19
1.14
91473--92292
134
6.1
134
86
2
1088
29
18
19
32
1.96
91473--92292
405
2.0
404
87
2
1171
29
18
19
32
1.96

Tables:   1

The End!