Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006170.1 Hibiscus syriacus cultivar Beakdansim tig00014657_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53357

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4626--4661
2
18.0
2
100
0
72
50
0
0
50
1.00
7134--7173
20
2.0
20
85
4
55
32
2
5
60
1.32
7954--8003
26
1.9
26
87
0
73
20
12
2
66
1.34
7928--8021
44
2.2
43
86
1
125
19
11
1
68
1.27
7980--8023
18
2.4
18
88
7
63
20
9
0
70
1.14
9865--9891
11
2.5
11
100
0
54
37
29
7
25
1.83
11016--11040
12
2.1
12
100
0
50
92
0
0
8
0.40
13504--13533
2
15.0
2
100
0
60
50
0
0
50
1.00
22413--22457
19
2.4
19
88
0
72
60
8
13
17
1.58
24859--24897
2
19.5
2
100
0
78
48
0
0
51
1.00
24897--24931
2
17.5
2
100
0
70
0
0
48
51
1.00
30000--30077
2
39.0
2
100
0
156
50
0
0
50
1.00
30231--30269
13
3.0
13
92
0
60
38
12
17
30
1.88
30095--30259
84
2.0
85
90
1
260
32
17
18
31
1.95
33150--34021
436
2.0
436
99
0
1726
30
15
18
36
1.91
52760--53323
131
4.3
134
75
9
372
31
14
21
32
1.94

Tables:   1

The End!