Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006173.1 Hibiscus syriacus cultivar Beakdansim tig00014675_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51103

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1188--1214
2
13.5
2
100
0
54
51
0
0
48
1.00
1349--1380
2
16.0
2
100
0
64
50
0
0
50
1.00
1672--1750
40
2.0
40
94
0
140
41
8
22
26
1.83
6651--6957
38
8.5
34
71
18
151
42
3
7
46
1.50
6684--6848
34
4.7
33
79
14
152
43
4
7
43
1.54
6751--6775
12
2.1
12
100
0
50
40
8
8
44
1.63
6785--6809
11
2.3
11
100
0
50
40
8
8
44
1.63
6656--6943
73
3.9
72
73
16
229
43
4
7
45
1.52
6906--6951
24
1.9
24
82
8
58
34
0
8
56
1.30
6957--6992
16
2.3
16
90
4
56
22
0
0
77
0.76
6955--6989
11
3.0
11
91
8
52
22
0
0
77
0.78
8118--8176
24
2.5
24
78
10
59
27
5
0
67
1.11
8166--8224
8
7.2
8
75
17
50
20
5
0
74
1.00
13353--13996
164
3.9
164
90
1
923
30
24
20
24
1.99
13312--13930
81
7.6
81
77
6
595
29
24
21
24
1.99
14654--14914
37
7.3
35
76
14
221
42
4
7
44
1.54
14621--14914
37
8.1
37
74
16
217
42
4
7
45
1.52
14758--14782
11
2.3
11
100
0
50
40
8
8
44
1.63
14703--14893
73
2.6
72
80
9
194
41
5
8
44
1.57
14938--14963
5
5.2
5
100
0
52
19
0
0
80
0.71
16090--16148
24
2.4
25
80
5
68
25
5
0
69
1.09
16138--16196
8
7.2
8
75
17
50
20
5
0
74
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16732--16765
18
1.9
17
88
5
50
38
0
0
61
0.96
17139--17175
2
18.5
2
100
0
74
48
0
0
51
1.00
18834--18948
60
1.9
60
82
3
142
35
14
12
37
1.84
25802--25834
17
1.9
17
88
11
50
63
0
3
33
1.10
27570--27643
33
2.2
34
92
2
123
63
12
9
14
1.52
31186--31223
17
2.2
18
90
4
60
63
7
0
28
1.23
45686--45732
20
2.4
20
92
3
78
36
23
21
19
1.95
46770--46818
2
25.5
2
91
8
84
48
0
0
51
1.00
47066--47108
23
1.9
22
90
4
68
69
4
11
13
1.33

Tables:   1

The End!