Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006181.1 Hibiscus syriacus cultivar Beakdansim tig00014701_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  96297

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9172--9330
81
2.0
81
92
0
264
44
16
6
32
1.73
17488--17533
24
1.9
24
82
8
58
41
4
6
47
1.49
19860--19911
26
2.0
26
92
0
86
32
9
19
38
1.84
25929--26011
42
2.0
43
87
2
123
24
2
15
57
1.50
30901--30940
20
2.0
20
90
4
64
50
10
20
20
1.76
32483--32521
15
2.5
15
87
4
51
79
17
2
0
0.84
37222--37293
31
2.3
31
97
0
135
34
12
20
31
1.90
38618--38670
13
4.0
13
80
2
61
64
13
3
18
1.43
43192--43236
2
22.5
2
100
0
90
48
0
0
51
1.00
52734--52766
17
1.9
17
93
0
57
36
0
0
63
0.95
53768--53818
24
2.1
24
85
0
66
39
25
7
27
1.83
53778--53835
28
2.2
25
82
11
64
36
27
12
24
1.91
55601--55658
30
1.9
31
82
6
75
65
10
1
22
1.32
65705--65789
40
2.1
40
100
0
170
24
16
31
27
1.96
65705--65764
19
3.1
19
65
25
52
23
16
33
26
1.96
65712--65781
21
3.5
21
69
23
69
25
20
27
27
1.99
67312--67365
23
2.3
23
80
0
72
44
16
12
25
1.84
70303--70360
29
2.0
29
93
0
98
51
8
8
31
1.63
72359--72407
22
2.2
22
100
0
98
51
4
16
28
1.63
93805--93879
37
2.0
37
86
0
105
25
28
12
34
1.91

Tables:   1

The End!