Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006182.1 Hibiscus syriacus cultivar Beakdansim tig00014706_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  76789

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12214--12244
15
2.1
15
100
0
62
25
35
6
32
1.82
21406--21430
9
2.8
9
100
0
50
20
36
0
44
1.52
22545--22578
15
2.3
15
100
0
68
14
29
0
55
1.40
24029--24160
61
2.3
57
85
7
169
58
16
12
12
1.63
24628--24667
21
1.9
21
89
0
62
52
5
5
37
1.45
31155--31201
24
2.0
24
82
0
58
14
46
0
38
1.45
31343--31423
38
2.1
38
100
0
162
43
24
9
22
1.83
40874--40915
2
21.0
2
100
0
84
50
0
0
50
1.00
41426--41575
32
4.8
31
82
7
171
30
17
16
36
1.92
41426--41577
62
2.4
62
84
5
191
30
17
17
35
1.92
46041--46192
32
4.9
31
88
7
211
29
17
19
34
1.94
56328--56364
14
2.5
15
91
4
58
29
10
0
59
1.31
56920--57076
64
2.5
64
81
10
162
27
19
19
33
1.96
60114--60165
27
2.0
25
85
10
70
59
0
1
38
1.08

Tables:   1

The End!