Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000619.1 Hibiscus syriacus cultivar Beakdansim tig00001197_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59588

Tables:   1   

This is table  1  of  1  ( 45 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6353--6429
32
2.4
33
82
8
95
38
12
5
42
1.66
6360--6420
32
1.9
32
90
3
97
32
14
6
45
1.71
12994--13249
130
2.0
130
99
0
503
48
7
13
30
1.69
17074--17153
31
2.6
31
74
21
78
78
3
3
13
1.02
17073--17146
21
3.7
21
73
12
66
79
2
2
14
0.95
17095--17146
12
4.3
11
80
20
59
84
1
1
11
0.78
17096--17146
26
2.0
26
88
7
77
84
1
1
11
0.79
18748--18788
5
8.4
5
79
15
50
21
0
0
78
0.76
19334--19605
91
3.0
91
90
0
418
24
21
16
37
1.94
19657--19832
91
1.9
92
89
1
273
23
22
16
37
1.93
19431--19973
227
2.4
227
90
1
840
25
22
17
35
1.95
21550--21590
5
8.4
5
79
15
50
21
0
0
78
0.76
22144--22410
91
2.9
91
89
0
408
25
21
16
37
1.94
22462--22637
91
1.9
92
89
1
273
24
22
15
37
1.93
22236--22778
227
2.4
227
89
1
804
25
22
16
34
1.95
24935--25010
12
6.8
12
77
19
58
5
17
0
77
0.94
24979--25010
4
8.2
4
93
6
57
0
21
0
78
0.76
24934--25010
23
3.5
22
76
20
63
5
16
0
77
0.94
24998--25054
23
2.5
23
97
0
105
3
22
3
70
1.18
24973--25080
23
4.3
26
77
16
104
2
20
1
75
1.03
24960--25079
10
10.9
11
72
14
88
3
19
1
75
1.02
25047--25078
17
1.9
16
93
6
55
3
15
0
81
0.82
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24929--25080
28
5.7
26
73
17
89
5
18
1
74
1.09
25738--25794
21
2.7
21
100
0
114
40
12
14
33
1.83
28277--28326
25
2.0
26
84
11
68
72
6
6
16
1.25
28292--28335
17
2.7
16
82
10
54
77
4
4
13
1.08
29574--29610
19
2.0
19
94
5
67
18
0
0
81
0.70
29778--29915
20
6.4
21
67
17
70
28
2
4
64
1.24
29927--29975
25
2.0
25
88
4
73
48
0
0
51
1.00
32919--32986
34
2.0
34
100
0
136
52
8
20
17
1.71
33090--33152
22
2.9
22
92
0
99
23
0
33
42
1.55
37705--37801
50
1.9
50
83
8
126
17
23
24
34
1.96
39164--39214
21
2.6
20
85
11
70
27
21
17
33
1.96
42488--42809
165
2.0
165
96
0
590
40
14
22
22
1.91
44002--44033
15
2.1
15
94
0
55
25
15
6
53
1.65
51297--51339
16
2.7
16
100
0
86
72
0
16
11
1.13
51691--51728
18
2.1
18
95
0
67
34
5
2
57
1.35
51984--52029
20
2.3
20
80
0
56
34
13
23
28
1.92
52371--52427
22
2.6
22
91
5
89
35
12
12
40
1.80
52784--53236
112
4.0
112
84
4
541
38
15
19
26
1.91
52786--53230
233
1.9
224
84
6
581
39
14
19
26
1.91
53604--53651
3
16.0
3
87
8
71
35
0
0
64
0.94
54858--54905
19
2.5
20
73
13
55
29
0
2
68
1.01
54859--54909
21
2.6
21
76
17
56
29
0
3
66
1.09
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58162--58203
15
2.6
17
81
7
52
23
9
0
66
1.21

Tables:   1

The End!