Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006190.1 Hibiscus syriacus cultivar Beakdansim tig00014729_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73636

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24594--25186
249
2.4
243
89
7
876
41
20
11
26
1.86
33297--33357
32
1.9
32
86
6
88
21
6
36
36
1.79
35394--35442
18
2.6
20
78
9
59
30
0
4
65
1.11
39434--39515
32
2.6
32
98
0
155
32
6
14
46
1.69
51468--51507
18
2.2
18
100
0
80
45
5
0
50
1.23
51498--51581
12
7.0
12
75
11
57
41
0
3
54
1.17
51500--51581
25
3.2
24
67
26
60
40
0
3
56
1.17
56245--56568
78
4.1
78
86
4
447
49
14
25
11
1.76
56245--56568
157
2.1
156
91
1
524
49
14
25
11
1.76
63262--63297
2
19.0
2
88
11
58
52
0
0
47
1.00
63317--63360
13
3.4
13
81
9
54
45
0
2
52
1.13
64981--65041
17
3.4
17
68
24
52
29
19
11
39
1.87
64979--65057
38
2.1
39
97
2
151
31
15
12
40
1.84
68866--69426
211
2.7
207
91
2
871
32
24
18
24
1.97
68869--69426
106
5.4
106
91
3
877
33
24
18
24
1.97
69616--69926
84
3.7
82
82
6
333
30
23
18
27
1.98
70513--70559
14
3.3
14
81
3
58
42
2
0
55
1.12
70513--70550
17
2.2
17
90
0
58
42
0
0
57
0.98
72169--72229
17
3.4
17
68
24
52
29
19
11
39
1.87
72167--72245
38
2.1
39
97
2
151
31
15
12
40
1.84

Tables:   1

The End!