Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006194.1 Hibiscus syriacus cultivar Beakdansim tig00014739_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63365

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12462--12502
15
2.6
16
84
7
57
4
7
4
82
0.93
20252--20290
16
2.5
16
87
4
53
35
2
23
38
1.68
20822--20877
29
1.9
29
92
7
96
26
5
10
57
1.54
24002--24103
28
3.6
28
70
15
100
22
9
14
52
1.71
29174--29217
2
22.0
2
100
0
88
50
0
0
50
1.00
29834--29867
16
2.1
17
88
5
52
41
2
11
44
1.56
41820--41939
3
39.0
3
84
8
152
62
0
1
35
1.05
44939--45082
60
2.4
60
84
0
189
34
20
13
32
1.91
47495--47599
55
1.9
55
84
0
138
26
17
21
34
1.95
48434--48801
195
1.9
195
91
1
612
24
29
20
26
1.99
54009--54288
106
2.6
108
76
9
252
30
24
13
31
1.94
53997--54417
55
7.8
55
81
4
376
29
23
14
32
1.94

Tables:   1

The End!