Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006198.1 Hibiscus syriacus cultivar Beakdansim tig00014754_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55238

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
656--686
2
15.5
2
93
0
53
51
3
0
45
1.17
25045--25292
38
7.0
37
72
21
133
44
5
6
43
1.52
25067--25292
36
6.4
36
73
18
142
43
5
6
44
1.53
25195--25314
31
3.6
31
70
14
96
48
5
4
42
1.44
25263--25339
33
2.4
31
82
4
91
46
1
3
48
1.28
26840--26906
30
2.2
30
86
7
91
13
10
2
73
1.21
26910--26948
3
13.0
3
89
10
62
30
2
0
66
1.05
30235--30327
27
3.4
27
98
0
177
26
18
13
40
1.88
45987--46013
12
2.2
12
100
0
54
25
7
7
59
1.51
46077--46152
30
2.4
30
84
8
89
26
18
19
35
1.95
52394--52431
2
19.0
2
100
0
76
50
0
0
50
1.00
53528--53606
41
1.9
42
86
2
115
41
3
1
53
1.27

Tables:   1

The End!