Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000620.1 Hibiscus syriacus cultivar Beakdansim tig00001198_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38247

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
245--424
64
2.9
64
90
5
278
32
21
14
31
1.93
1659--1699
21
2.0
21
85
0
55
29
29
19
21
1.98
2209--2421
103
2.1
98
89
6
329
24
13
24
37
1.92
8493--8535
21
2.0
21
86
0
59
30
27
23
18
1.98
8563--8600
20
1.9
20
88
0
58
23
34
31
10
1.89
9073--9289
102
2.1
103
97
0
409
24
13
24
37
1.91
9314--9368
23
2.4
23
90
0
83
21
21
27
29
1.99
13502--13561
31
1.9
31
83
6
77
40
3
6
50
1.45
13997--14024
14
2.0
14
100
0
56
42
14
7
35
1.73
19454--19478
2
12.5
2
100
0
50
48
0
0
52
1.00
19692--19721
15
2.0
15
93
0
51
36
0
0
63
0.95
25470--25520
15
3.5
15
72
5
59
66
5
15
11
1.41
25472--25539
29
2.3
29
100
0
136
61
7
16
14
1.54
28828--28886
31
1.9
31
89
0
91
37
16
16
28
1.92
30691--30717
8
3.4
8
100
0
54
40
11
0
48
1.39
32966--33025
31
1.9
31
96
0
111
33
16
20
30
1.94
35025--35099
34
2.2
34
73
2
80
33
24
29
13
1.93
35162--35245
24
3.5
24
82
6
98
42
19
14
23
1.87

Tables:   1

The End!