Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006201.1 Hibiscus syriacus cultivar Beakdansim tig00014767_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61086

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8739--8778
19
2.1
19
100
0
80
37
15
10
37
1.80
9319--9385
33
2.0
33
100
0
134
25
17
26
29
1.98
9445--9487
20
2.2
20
86
0
59
18
4
18
58
1.56
9493--9591
46
2.2
45
87
8
139
38
7
22
32
1.81
25937--25998
21
3.0
21
90
0
97
56
0
6
37
1.25
27593--27617
2
12.5
2
100
0
50
48
0
0
52
1.00
35238--35283
20
2.4
21
79
17
55
23
23
19
32
1.97
36319--36347
14
2.0
15
93
6
51
55
31
0
13
1.39
42857--42931
23
3.1
23
75
12
62
74
5
4
16
1.15
42972--43095
51
2.4
52
82
9
139
58
6
11
23
1.55
44540--44739
58
3.4
58
81
1
222
28
17
26
28
1.97
44809--44876
20
3.5
20
70
8
59
33
20
22
23
1.97
47154--47227
4
19.8
4
82
10
77
1
18
1
78
0.90
47154--47243
12
7.9
11
75
17
69
3
17
1
77
0.96
47147--47267
53
2.2
53
81
10
138
4
16
1
76
1.03
51096--51200
51
2.1
50
82
5
122
58
6
10
24
1.56
51103--51225
51
2.4
50
76
10
115
56
6
11
25
1.58
58936--58960
13
1.9
13
100
0
50
32
0
52
16
1.44
61028--61080
22
2.4
22
90
0
88
35
18
22
22
1.95

Tables:   1

The End!