Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006211.1 Hibiscus syriacus cultivar Beakdansim tig00014792_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45547

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
575--715
43
3.3
43
87
2
194
24
14
31
29
1.95
803--994
86
2.2
88
87
3
271
23
20
22
32
1.98
894--2024
132
8.7
132
89
4
1698
24
20
22
31
1.98
894--2024
260
4.4
262
89
4
1660
24
20
22
31
1.98
894--2024
392
2.9
388
89
4
1734
24
20
22
31
1.98
6511--6550
18
2.2
18
90
0
62
20
20
30
30
1.97
10324--10349
12
2.2
12
100
0
52
15
23
23
38
1.92
10400--10618
29
7.6
29
81
5
221
35
21
5
38
1.75
10622--10672
22
2.3
22
82
0
66
13
25
41
19
1.88
17880--18039
29
5.6
29
88
2
218
33
21
5
40
1.77
17879--18039
57
2.8
57
87
0
223
33
21
5
39
1.76
18056--18100
19
2.4
19
92
0
72
20
31
28
20
1.97
29377--29407
15
2.1
15
93
0
53
70
0
16
12
1.16
30276--30379
39
2.6
39
85
7
138
56
14
7
21
1.63
33921--33992
20
3.5
20
81
7
90
22
19
12
45
1.83
35557--35609
15
3.5
15
76
5
61
20
7
30
41
1.80
38010--38125
29
4.0
29
85
3
153
33
3
14
48
1.61
38012--38144
29
4.6
29
79
4
124
33
3
14
48
1.61
40038--40121
42
2.0
42
97
0
159
27
33
15
23
1.95

Tables:   1

The End!