Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006213.1 Hibiscus syriacus cultivar Beakdansim tig00014801_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55744

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2433--2507
10
8.7
10
67
31
57
57
18
12
12
1.65
2439--2502
16
4.0
16
91
0
110
56
18
12
12
1.67
3956--4114
79
2.0
78
90
4
248
34
18
13
33
1.89
4757--4799
2
22.0
2
95
4
79
51
0
0
48
1.00
4754--4798
21
2.1
21
100
0
90
53
0
0
46
1.00
8726--8762
18
2.1
18
89
0
56
27
13
24
35
1.93
8945--8985
15
2.9
15
75
17
52
63
0
0
36
0.95
9513--9545
9
3.8
9
92
8
59
27
24
24
24
2.00
9513--9545
17
1.9
17
100
0
66
27
24
24
24
2.00
10178--10269
30
2.9
32
83
6
134
15
9
30
44
1.78
10855--10902
16
2.8
18
90
6
73
29
31
6
33
1.82
17581--17638
21
2.8
21
91
0
98
25
15
18
39
1.91
19024--19071
19
2.5
20
86
3
62
29
14
6
50
1.67
19886--19948
33
1.9
33
100
0
126
25
26
15
31
1.96
28310--28359
23
2.2
23
88
0
73
38
8
24
30
1.84
28848--29497
182
3.6
182
85
4
864
28
17
12
42
1.84
31362--31399
20
1.9
20
89
10
60
57
5
0
36
1.21
33674--33718
22
2.1
22
88
12
67
66
4
0
28
1.11
33683--33780
37
2.7
34
75
16
90
66
4
3
26
1.24
34580--34606
14
1.9
14
100
0
54
0
14
0
85
0.61
35096--35172
3
26.0
3
81
7
95
67
0
1
31
0.99
35539--35871
123
2.7
123
86
3
458
26
18
14
41
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
35791--35990
106
1.9
105
89
3
312
28
21
13
38
1.90
36359--36429
22
3.2
22
85
0
97
38
11
12
38
1.79
37054--37106
22
2.5
21
88
8
81
58
0
13
28
1.35
47655--47718
26
2.5
25
73
12
58
60
0
9
29
1.28
48185--48224
2
21.0
2
90
10
66
50
0
0
50
1.00
48602--48654
23
2.3
22
81
18
63
66
5
0
28
1.15
50030--50113
3
29.0
3
80
7
102
65
0
1
33
1.00
50881--51008
51
2.5
50
83
1
148
17
33
31
17
1.93
53825--53859
3
11.7
3
87
0
52
2
31
28
37
1.72

Tables:   1

The End!