Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006216.1 Hibiscus syriacus cultivar Beakdansim tig00014808_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  82255

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1499--1532
13
2.6
14
90
9
54
70
0
0
29
0.87
2568--2725
83
1.9
82
83
3
201
45
14
15
24
1.83
12047--12103
24
2.4
24
93
0
96
29
31
15
22
1.95
22386--22495
39
2.8
37
77
9
105
47
1
17
33
1.58
25604--25792
41
4.8
41
78
7
185
30
19
17
32
1.95
26631--26758
68
2.0
67
87
7
192
41
6
8
43
1.60
26630--26734
34
3.2
33
71
18
87
40
6
7
45
1.59
26661--26762
34
3.0
33
76
15
109
40
7
8
43
1.65
27242--27274
15
2.2
15
89
10
50
30
3
0
66
1.06
41883--41986
50
2.0
51
85
3
138
35
9
4
50
1.57
42934--43034
48
2.1
48
87
3
152
24
16
13
44
1.85
43586--43614
2
14.5
2
100
0
58
51
0
0
48
1.00
49547--49584
15
2.6
15
91
4
60
23
23
28
23
1.99
51526--51558
15
2.1
16
94
5
59
36
6
6
51
1.51
56637--56680
20
2.3
19
81
11
54
20
27
9
43
1.82
56643--56680
20
1.9
20
88
0
58
21
26
10
42
1.85
65444--65495
25
2.2
23
86
6
68
50
1
0
48
1.12
68091--68171
21
3.8
20
70
20
58
20
16
27
35
1.94
68092--68178
44
2.0
44
88
0
129
22
16
26
34
1.95
73324--73363
21
2.0
21
85
5
55
37
15
17
30
1.90
79500--79543
21
2.1
21
86
0
61
27
25
18
29
1.98

Tables:   1

The End!