Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006218.1 Hibiscus syriacus cultivar Beakdansim tig00014810_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59833

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11666--11699
15
2.2
16
89
5
52
76
5
2
14
1.09
11907--11948
22
2.0
22
85
4
59
54
7
2
35
1.41
13838--13877
3
13.0
3
84
5
53
65
2
2
30
1.19
24549--24594
19
2.4
19
88
0
65
17
23
30
28
1.97
24609--24771
58
2.8
58
84
9
206
36
5
22
35
1.77
24609--24771
30
5.6
29
76
11
163
36
5
22
35
1.77
29740--29822
29
2.8
29
92
1
139
43
9
14
32
1.78
34502--34584
29
2.8
29
92
1
139
43
9
14
32
1.78
38727--38771
21
2.1
21
84
8
56
37
24
0
37
1.56
41540--41607
23
3.0
23
82
0
82
19
26
23
30
1.98
41798--41873
2
38.0
2
100
0
152
50
0
0
50
1.00
58846--58884
19
2.1
19
95
0
69
56
5
0
38
1.22

Tables:   1

The End!