Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006221.1 Hibiscus syriacus cultivar Beakdansim tig00014821_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62157

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2532--2592
23
2.6
22
80
10
68
24
16
0
59
1.37
6514--6565
18
2.9
18
91
0
86
42
9
1
46
1.47
7487--8065
122
4.7
123
88
6
793
40
14
18
26
1.89
8410--8479
3
24.0
3
88
8
101
31
0
0
68
0.90
8411--8479
29
2.4
29
92
4
113
31
0
0
68
0.90
9973--10279
146
2.1
141
88
5
449
36
3
7
52
1.48
9993--10279
141
2.0
145
89
4
451
35
4
8
51
1.50
11474--11525
22
2.3
23
80
10
61
61
3
0
34
1.14
23737--23809
31
2.4
31
90
2
121
32
12
28
26
1.92
28335--28449
60
1.9
59
84
5
151
27
25
21
25
1.99
38077--38158
23
3.7
22
80
4
67
24
34
23
18
1.96
38077--38137
23
2.7
22
87
2
77
24
32
24
18
1.97
38099--38159
23
2.8
22
85
5
70
21
37
21
19
1.94
49882--49910
2
14.5
2
100
0
58
51
0
0
48
1.00
50501--50650
69
2.1
69
80
7
156
37
12
9
41
1.74
59244--59286
18
2.4
18
88
0
59
48
0
30
20
1.50
59237--59298
24
2.6
23
80
10
63
46
3
32
17
1.64

Tables:   1

The End!