Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000623.1 Hibiscus syriacus cultivar Beakdansim tig00001204_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52551

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1346--1563
113
1.9
112
86
2
312
33
15
20
30
1.93
1740--1798
31
1.9
31
96
0
109
33
15
16
33
1.91
4084--4138
22
2.5
22
87
0
83
34
14
14
36
1.87
4570--6510
559
3.5
562
94
2
3329
36
15
20
28
1.93
4570--6510
113
17.3
113
94
1
3308
36
15
20
28
1.93
6853--6897
22
2.0
23
91
4
74
24
0
4
71
1.05
6860--6936
19
4.1
19
75
6
68
37
0
1
61
1.05
6863--6912
22
2.3
22
82
0
64
32
0
2
66
1.03
6863--6912
3
18.0
3
80
15
54
32
0
2
66
1.03
7359--7383
7
3.6
7
100
0
50
56
44
0
0
0.99
8260--8306
22
2.2
22
85
7
62
44
6
0
48
1.28
8448--8486
20
2.0
20
84
0
51
35
0
0
64
0.94
8363--8583
115
1.9
113
82
5
275
38
8
7
45
1.62
11685--11720
17
2.1
18
89
5
56
66
0
0
33
0.92
21156--21226
22
3.3
22
86
7
101
33
30
11
23
1.90
21168--21247
20
4.0
20
88
4
108
31
28
11
28
1.91
21194--21262
20
3.5
19
88
2
66
30
27
11
30
1.92
28011--28045
17
2.1
17
89
10
54
65
0
0
34
0.93
37497--37567
22
3.3
22
86
7
101
33
30
11
23
1.90
37509--37589
20
4.0
20
88
3
108
30
28
11
29
1.91
37535--37605
20
3.5
20
88
0
70
29
26
11
32
1.91
46153--46181
2
14.5
2
100
0
58
51
0
0
48
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46801--46872
30
2.4
30
83
0
90
25
20
19
34
1.96

Tables:   1

The End!