Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006231.1 Hibiscus syriacus cultivar Beakdansim tig00014851_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58899

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
286--342
30
1.9
30
82
7
71
36
8
10
43
1.70
383--449
3
22.3
3
100
0
134
0
32
0
67
0.91
1399--1518
3
40.7
3
93
6
210
33
0
66
0
0.92
1537--1601
30
2.2
30
82
0
76
38
10
16
33
1.84
3386--3491
40
2.7
40
75
11
135
19
15
16
49
1.80
5729--5792
21
3.0
20
76
17
58
28
3
0
68
1.04
8426--8466
22
1.9
21
85
5
55
29
24
14
31
1.95
9160--9230
35
2.0
35
91
0
115
49
11
11
28
1.73
15010--15042
3
11.0
3
100
0
66
33
0
0
66
0.92
19100--19148
2
24.5
2
87
0
62
46
4
48
0
1.20
25631--25687
27
2.1
27
81
15
66
57
12
0
29
1.35
26731--26771
13
3.4
12
80
19
50
31
2
0
65
1.05
31387--31685
60
5.0
60
89
0
402
38
19
18
23
1.93
31392--31689
119
2.5
119
86
1
409
38
19
18
23
1.93
32970--33002
17
2.0
17
88
5
50
30
18
6
45
1.73
33600--33673
25
3.0
25
84
2
87
31
22
21
24
1.99
33804--33865
15
4.1
15
87
0
70
38
19
4
37
1.73
38796--38831
11
3.2
11
88
7
54
2
0
16
80
0.83
38796--38832
6
6.3
6
87
6
58
2
0
16
81
0.81
42270--42310
17
2.4
17
78
21
50
53
0
0
46
1.00
50565--50609
23
2.0
23
81
0
54
11
24
8
55
1.63
54641--54674
2
17.5
2
93
6
61
52
0
0
47
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
54955--54996
21
2.0
21
100
0
84
28
14
28
28
1.95
55648--55913
19
13.3
19
71
14
187
39
21
19
19
1.92
55663--55892
61
3.8
61
71
14
215
39
22
20
18
1.93
55720--55998
41
6.9
41
83
8
331
38
22
20
18
1.93
55743--55816
21
3.6
21
77
3
96
33
27
18
20
1.96
55682--55995
162
1.9
163
88
5
474
38
22
20
18
1.93
56389--56500
39
2.9
39
74
1
109
34
25
23
16
1.95

Tables:   1

The End!