Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006233.1 Hibiscus syriacus cultivar Beakdansim tig00014857_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  84115

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
98--150
24
2.2
24
82
0
61
33
3
15
47
1.63
1669--2404
200
3.7
197
83
4
865
37
13
16
32
1.88
2099--2145
20
2.3
21
85
3
60
40
6
14
38
1.72
4011--4059
19
2.6
19
80
0
62
34
6
8
51
1.57
5548--5650
45
2.3
44
83
9
120
40
17
13
28
1.87
6258--6321
23
2.8
23
75
13
69
21
21
25
31
1.98
15426--16124
199
3.5
199
83
4
844
39
14
15
31
1.87
16144--16308
87
1.9
86
91
1
267
34
13
10
41
1.78
20783--20860
38
2.1
38
80
4
86
44
1
5
48
1.32
20902--20969
21
3.2
21
64
22
52
38
2
5
52
1.41
20918--20991
15
5.1
15
70
15
66
40
1
2
55
1.22
20901--20992
42
2.2
42
96
1
168
41
2
4
52
1.33
25254--25298
22
2.0
22
100
0
90
46
4
8
40
1.55
30095--30259
90
1.8
91
85
1
233
42
15
13
27
1.85
30348--30526
86
2.1
86
98
0
349
36
6
21
35
1.79
34322--34356
17
1.9
19
88
11
56
51
14
0
34
1.42
34354--34408
28
2.0
27
82
3
65
61
1
0
36
1.06
35658--35982
70
4.6
69
81
9
322
44
3
11
40
1.59
35658--35982
105
3.1
104
85
7
408
44
3
11
40
1.59
36040--36094
13
4.4
12
76
15
58
23
1
1
72
1.04
37234--37290
23
2.5
23
88
2
80
24
5
0
70
1.08
37226--37372
10
14.6
10
67
16
56
22
6
0
71
1.08
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
37259--37355
49
1.9
49
81
10
115
19
8
0
72
1.10
37236--37340
24
4.2
24
73
16
81
20
5
0
73
1.04
37288--37359
24
3.0
23
75
18
67
19
6
0
73
1.05
40502--40547
23
2.0
23
86
0
65
19
23
23
32
1.97
40743--40816
3
24.7
3
91
0
121
31
1
0
67
0.99
47659--47762
3
34.7
3
94
3
183
34
0
0
64
1.00
53634--53703
18
3.6
20
78
16
76
25
31
22
20
1.98
54668--54828
64
2.5
62
83
8
180
27
21
16
34
1.95
54859--54914
21
2.7
21
97
0
103
28
21
26
23
1.99
61415--61702
35
8.3
35
80
7
300
42
3
11
42
1.57
63033--63077
10
4.4
10
85
2
54
24
4
0
71
1.05
67825--67871
25
1.9
25
82
4
60
46
8
19
25
1.77
71143--71197
29
2.0
28
82
7
67
45
9
1
43
1.46
72345--72370
6
4.3
6
100
0
52
50
0
34
15
1.45
73172--73506
43
7.7
43
72
12
168
49
6
17
25
1.71
73224--73352
41
3.1
41
80
10
154
48
6
22
23
1.73
73222--73515
43
6.8
43
74
12
174
51
6
17
24
1.69
73349--73515
89
1.9
89
81
7
205
54
6
13
25
1.63
74316--74371
21
2.7
21
94
0
94
26
21
25
26
1.99
76890--76965
31
2.4
32
84
2
91
42
28
13
15
1.85
77322--77361
16
2.5
17
84
12
57
35
37
12
15
1.85

Tables:   1

The End!