Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006237.1 Hibiscus syriacus cultivar Beakdansim tig00014864_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  77919

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5868--5912
16
2.8
16
83
10
56
28
8
6
55
1.56
6689--7489
83
9.7
82
90
5
1183
26
13
23
36
1.91
6689--7489
165
4.8
165
94
2
1279
26
13
23
36
1.91
6689--7489
248
3.2
249
93
3
1332
26
13
23
36
1.91
8125--8766
116
5.6
116
91
4
882
35
14
21
28
1.92
8900--8957
3
19.7
3
89
3
91
32
1
0
65
1.03
8956--8990
14
2.4
15
95
4
63
62
0
0
37
0.95
9419--9466
17
2.9
16
74
14
53
64
10
22
2
1.35
14228--14349
60
2.1
59
85
3
165
36
20
10
31
1.87
17480--17543
31
2.1
31
87
0
92
6
31
31
31
1.82
19151--19190
17
2.4
17
91
0
62
27
15
12
45
1.82
19833--19865
5
6.6
5
92
0
57
36
3
0
60
1.12
19821--19865
15
2.9
15
90
3
63
35
4
2
57
1.31
23735--23802
34
2.0
34
94
0
118
44
11
20
23
1.84
28350--28416
34
2.0
34
96
0
125
41
11
22
23
1.87
31044--31089
21
2.2
21
88
3
67
54
6
2
36
1.39
44784--44818
18
1.9
18
88
0
52
28
17
0
54
1.43
54418--54469
26
2.0
26
96
0
95
25
19
19
36
1.95
56799--56831
16
2.1
16
100
0
66
45
18
18
18
1.86
67381--67426
19
2.4
19
96
0
83
28
32
17
21
1.96
76957--76986
13
2.3
13
100
0
60
63
0
23
13
1.29

Tables:   1

The End!