Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006239.1 Hibiscus syriacus cultivar Beakdansim tig00014867_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  85424

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
355--418
17
3.7
17
91
2
101
28
29
9
32
1.88
1046--1095
9
5.2
9
80
19
57
64
0
0
36
0.94
1028--1103
30
2.4
32
89
6
120
59
1
0
39
1.06
6751--6797
24
2.0
24
87
4
69
53
17
19
10
1.72
8102--8145
20
2.2
20
84
8
54
11
15
22
50
1.76
9453--9487
15
2.3
15
90
9
54
42
20
22
14
1.88
12758--13020
122
2.1
122
83
4
323
23
22
20
33
1.97
12611--13146
288
1.9
288
84
1
716
24
22
19
33
1.97
13208--13355
36
4.1
36
81
6
156
44
15
13
26
1.83
13362--13533
44
3.9
45
84
2
222
38
19
17
24
1.93
13362--13533
89
1.9
89
83
4
222
38
19
17
24
1.93
14976--15002
13
2.1
13
100
0
54
14
14
0
70
1.17
15534--15582
18
2.7
18
90
0
71
59
0
6
34
1.22
16590--16624
18
1.9
18
100
0
70
25
34
17
22
1.96
16849--16901
15
3.3
17
72
22
51
32
24
5
37
1.79
19056--19116
2
31.0
2
93
3
106
47
0
0
52
1.00
24671--24792
16
7.8
16
85
5
178
36
8
29
25
1.85
28836--28864
14
2.0
15
93
6
51
37
0
0
62
0.96
30267--30294
11
2.5
11
100
0
56
42
7
28
21
1.79
31319--31421
45
2.3
44
82
8
136
35
7
20
35
1.82
31397--31460
14
4.4
14
75
7
65
29
7
21
40
1.82
42899--42924
11
2.4
11
100
0
52
38
0
0
61
0.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
47770--47817
3
16.0
3
87
8
71
66
0
0
33
0.92
60448--60475
2
14.0
2
100
0
56
50
0
0
50
1.00
61984--62013
3
10.0
3
92
0
51
33
3
0
63
1.11
62710--62795
44
1.9
45
81
6
104
45
1
1
52
1.16
62936--62977
21
2.0
21
86
9
59
50
0
2
47
1.14
64037--64153
60
2.0
60
81
3
137
36
19
16
27
1.93
67173--67339
60
2.8
60
81
2
185
38
3
22
34
1.72
67186--67339
59
2.6
60
81
3
186
40
3
21
34
1.72
72471--72532
24
2.6
24
100
0
124
30
16
3
50
1.61
77966--78024
2
30.0
2
96
3
111
49
0
0
50
1.00
81867--81900
15
2.3
15
94
0
59
38
20
14
26
1.91

Tables:   1

The End!