Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006241.1 Hibiscus syriacus cultivar Beakdansim tig00014873_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  97080

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6458--6482
10
2.5
10
100
0
50
60
12
8
20
1.57
16078--16156
40
2.0
40
100
0
158
24
17
25
32
1.97
16260--16328
21
3.2
21
63
25
54
39
10
21
28
1.86
16259--16412
43
3.5
44
90
1
247
38
9
22
29
1.85
20393--20435
18
2.4
18
84
0
59
32
27
2
37
1.70
25933--26038
54
2.0
54
100
0
212
31
7
20
40
1.80
26813--26872
31
2.0
29
84
12
77
31
6
30
31
1.83
34270--34296
11
2.5
11
100
0
54
0
0
11
88
0.50
53306--53360
6
9.0
6
79
15
51
27
0
1
70
0.97
53319--53360
11
3.6
11
79
20
50
23
0
0
76
0.79
59142--59177
16
2.2
16
95
0
63
30
5
22
41
1.76
60264--60353
47
1.9
46
93
2
153
32
14
4
48
1.63
66768--66831
30
2.2
30
82
2
76
42
3
17
37
1.65
68036--68171
39
3.5
39
82
6
159
16
25
24
33
1.96
73659--73695
14
2.6
15
87
12
60
27
18
13
40
1.88
74218--74252
13
2.7
13
91
8
54
42
11
5
40
1.65
78725--78782
30
2.0
30
86
3
82
44
3
15
36
1.63
79334--79368
18
1.9
18
88
0
52
25
22
20
31
1.98
80142--80282
39
3.6
39
90
0
192
16
26
25
31
1.96
81440--81852
59
7.0
59
87
2
580
28
23
11
37
1.89
81440--81852
117
3.5
117
87
3
580
28
23
11
37
1.89
81753--81850
32
3.2
32
64
19
82
27
25
10
36
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
88421--88839
59
7.1
59
91
0
649
27
24
11
36
1.89
95894--96046
63
2.5
63
84
7
190
32
21
19
26
1.97

Tables:   1

The End!