Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006243.1 Hibiscus syriacus cultivar Beakdansim tig00014884_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  98989

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2264--2341
29
2.6
30
74
9
79
41
7
12
38
1.72
13879--13921
20
2.2
20
91
0
68
34
20
11
32
1.89
21131--21156
2
13.0
2
100
0
52
50
0
0
50
1.00
24984--25017
15
2.3
15
100
0
68
58
0
11
29
1.33
38910--38944
3
11.7
3
93
0
61
28
0
0
71
0.86
40278--40312
6
5.8
6
89
0
52
22
51
14
11
1.74
45763--45821
22
2.7
22
94
0
100
37
18
8
35
1.81
46483--46575
28
3.3
28
84
3
107
47
1
11
39
1.47
47033--47067
15
2.3
15
90
0
61
28
11
11
48
1.74
49769--49847
2
39.5
2
100
0
158
50
0
0
49
1.00
60862--60926
17
3.8
17
83
2
85
32
9
29
29
1.88
62214--62374
64
2.5
63
85
6
200
35
19
19
25
1.95
63428--63500
36
2.0
36
97
0
137
35
0
27
36
1.57
66477--66637
64
2.5
63
83
6
191
35
18
19
26
1.95
67316--67379
30
2.1
30
85
0
83
18
18
28
34
1.95
82110--82149
22
2.0
20
85
14
55
22
15
25
37
1.93
83145--83171
3
9.0
3
100
0
54
66
0
0
33
0.92
89262--89365
50
2.1
48
79
10
120
17
30
27
24
1.97
92967--93053
35
2.5
34
80
12
97
55
10
8
26
1.61
93258--93328
6
12.8
6
73
16
64
18
32
15
33
1.92
93253--93320
21
3.2
21
89
0
109
16
33
16
33
1.91
93280--93322
9
4.8
9
79
0
50
18
34
13
32
1.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
93271--93317
15
3.1
15
81
0
58
17
36
14
31
1.90
95168--95389
111
2.0
111
95
0
399
44
11
8
36
1.71
95652--95771
50
2.4
49
80
5
132
24
27
34
14
1.94

Tables:   1

The End!