Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006247.1 Hibiscus syriacus cultivar Beakdansim tig00014890_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48560

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11815--11886
32
2.2
32
82
2
90
31
6
25
36
1.82
11895--11948
28
1.9
28
92
0
90
20
7
22
50
1.73
12513--12577
16
3.9
16
77
4
67
27
30
6
35
1.81
13798--13881
42
2.0
42
97
0
159
39
21
25
14
1.91
15288--15562
68
4.0
68
87
0
397
33
13
23
30
1.93
15494--15879
80
5.0
78
81
9
391
35
11
25
27
1.90
15641--15784
70
2.1
70
93
0
243
36
10
26
27
1.89
15556--15860
150
2.0
149
86
2
423
35
11
25
27
1.90
17473--17505
16
2.1
16
100
0
66
57
24
12
6
1.57
17578--17646
16
4.3
16
90
0
111
60
21
7
10
1.52
18272--18322
24
2.1
24
88
0
75
52
19
11
15
1.73
18294--18323
14
2.1
14
100
0
60
46
23
16
13
1.82
18516--18674
64
2.5
63
84
7
205
26
18
23
32
1.97
19854--20013
65
2.5
63
83
6
196
30
23
18
27
1.98
19985--20033
19
2.6
19
84
9
57
24
28
20
26
1.99
28500--28700
65
3.1
64
78
13
189
31
23
18
26
1.98
30388--30432
23
2.0
23
86
0
63
26
28
24
20
1.99
30411--30714
149
2.0
149
98
0
581
34
20
18
26
1.96
31599--31633
18
1.9
18
88
11
54
25
14
5
54
1.62
32218--32262
21
2.1
21
87
0
63
15
24
28
31
1.96
37580--38426
452
1.9
452
91
0
1408
24
22
27
25
2.00

Tables:   1

The End!