Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006263.1 Hibiscus syriacus cultivar Beakdansim tig00014939_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  95497

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2524--2561
4
10.0
4
83
11
53
71
0
0
28
0.87
2528--2558
14
2.2
14
100
0
62
70
0
0
29
0.87
8118--8143
3
8.7
3
100
0
52
69
0
0
30
0.89
8798--8867
31
2.3
31
97
0
131
21
37
2
38
1.68
15188--15235
23
2.1
23
88
0
69
35
12
18
33
1.89
15711--15783
23
3.2
23
90
0
110
38
20
5
35
1.76
16148--16197
23
2.2
23
85
0
64
38
18
6
38
1.75
16563--16612
23
2.2
23
88
0
73
40
22
4
34
1.72
15734--16874
415
2.8
415
96
0
2124
38
10
7
43
1.66
19406--20165
183
4.2
183
97
0
1414
34
16
14
34
1.90
22603--25364
200
13.9
200
93
3
4695
31
17
15
36
1.91
25465--25525
19
3.3
18
88
2
59
52
11
1
34
1.47
25477--25525
19
2.6
19
96
0
89
55
10
2
32
1.45
26104--26128
4
6.2
4
100
0
50
48
28
0
24
1.52
27325--27390
33
2.0
33
90
0
105
22
48
0
28
1.51
27424--27488
21
3.1
21
90
0
94
18
30
9
41
1.82
29704--29746
20
2.3
18
85
14
61
20
16
11
51
1.75
29676--30147
180
2.6
182
88
2
680
27
16
14
42
1.86
36577--36615
17
2.4
17
95
4
71
51
5
0
43
1.24
39693--39736
19
2.3
19
88
7
63
40
4
15
38
1.68
50398--50436
17
2.4
17
95
4
71
51
5
0
43
1.24
55990--56029
14
2.9
14
82
14
55
42
5
15
37
1.68
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58790--58849
29
2.1
29
100
0
120
28
20
21
30
1.98
61424--61492
30
2.3
30
85
5
86
40
4
23
31
1.74
67511--67543
12
2.8
12
95
4
59
87
0
12
0
0.53

Tables:   1

The End!