Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006271.1 Hibiscus syriacus cultivar Beakdansim tig00014951_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62946

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7369--7393
13
1.9
13
100
0
50
24
16
16
44
1.86
7870--7927
26
2.3
26
80
14
68
50
8
10
31
1.67
20683--20723
20
2.1
20
90
4
66
65
0
7
26
1.18
24078--24111
5
6.8
5
100
0
68
0
20
58
20
1.39
24470--24514
18
2.6
18
86
6
67
28
31
4
35
1.77
25464--25519
27
2.0
28
96
3
105
14
37
0
48
1.44
25496--25529
17
2.0
17
88
0
50
11
35
0
52
1.38
31092--31181
29
3.1
29
95
0
162
24
23
8
43
1.82
31150--31386
81
2.9
80
85
2
314
29
22
12
35
1.91
31337--31846
68
7.5
68
90
0
779
30
23
14
30
1.94
31825--31866
20
2.1
20
100
0
84
35
16
9
38
1.81
35207--35254
19
2.5
19
82
0
60
20
8
14
56
1.64
52792--52833
21
2.0
21
90
0
66
30
28
19
21
1.97
52843--52892
18
2.8
18
79
11
66
32
34
18
16
1.92

Tables:   1

The End!