Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006278.1 Hibiscus syriacus cultivar Beakdansim tig00014976_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  92874

Tables:   1   

This is table  1  of  1  ( 49 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1101--1271
59
2.8
60
72
7
152
35
14
13
36
1.86
1750--1821
28
2.5
29
86
6
103
44
5
5
44
1.50
3106--3233
39
3.2
39
65
11
98
31
21
19
27
1.98
3098--3269
80
2.1
81
93
3
294
33
18
20
27
1.96
7243--7279
20
1.9
19
89
10
58
37
24
2
35
1.70
7937--7987
21
2.3
23
83
12
72
31
25
13
29
1.94
11472--11523
21
2.4
22
84
9
63
30
26
15
26
1.96
18626--18671
20
2.2
22
88
7
69
34
8
4
52
1.52
26668--26852
56
3.4
55
73
8
171
29
21
15
33
1.94
26719--26985
137
2.0
136
80
6
299
28
22
14
34
1.93
27042--27106
28
2.3
27
81
7
67
32
23
15
29
1.95
32356--32745
189
2.1
188
95
0
699
36
24
12
26
1.92
33839--33892
28
2.0
27
82
10
65
46
1
0
51
1.11
34001--34033
2
16.5
2
100
0
66
51
0
0
48
1.00
37118--37156
20
2.0
20
84
0
51
69
12
0
17
1.19
38025--38056
15
2.1
16
94
5
57
3
12
6
78
1.06
38562--38664
3
34.3
3
96
0
188
64
0
1
33
1.05
38988--39771
113
6.9
113
90
0
1210
29
18
14
37
1.90
40387--40901
83
6.2
83
97
0
942
36
21
14
27
1.92
42022--42103
17
4.9
17
79
13
82
0
17
0
82
0.66
42026--42103
10
8.0
10
83
7
81
0
16
0
83
0.65
42022--42100
26
3.0
25
85
14
106
0
16
0
83
0.65
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42057--42102
12
3.8
12
83
13
51
0
19
0
80
0.71
52689--52737
23
2.2
22
85
10
64
65
2
4
28
1.22
53408--53468
13
4.4
14
74
15
63
72
4
0
22
1.04
53657--53969
157
2.0
157
92
2
522
46
7
14
31
1.73
54451--54481
15
2.1
15
100
0
62
6
12
6
74
1.21
55566--55600
2
18.0
2
94
5
63
51
0
0
48
1.00
55599--55679
28
3.0
27
79
13
87
43
2
3
50
1.33
58005--58036
14
2.3
14
100
0
64
43
6
0
50
1.27
59754--59788
3
12.0
3
93
6
63
65
0
0
34
0.93
59756--59784
14
2.1
14
100
0
58
65
0
0
34
0.93
59754--59787
17
2.0
17
100
0
68
64
0
0
35
0.94
60089--60164
40
1.9
40
86
0
107
23
17
32
26
1.96
60189--60284
29
3.3
30
84
7
126
50
8
16
25
1.73
60635--60754
36
3.5
35
72
19
101
41
10
17
30
1.83
60920--61018
37
2.7
37
92
1
155
43
10
16
30
1.80
61072--61151
38
2.1
37
79
2
88
38
13
16
31
1.87
65520--65603
37
2.3
38
87
6
120
33
4
19
42
1.72
66249--66313
2
32.5
2
100
0
130
49
0
0
50
1.00
69094--69186
30
3.1
30
87
7
109
55
13
15
15
1.69
69112--69186
30
2.5
30
93
4
125
56
13
14
16
1.69
72699--72748
3
17.0
3
86
12
68
64
0
0
36
0.94
80194--80224
4
7.8
4
100
0
62
25
0
0
74
0.82
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
85660--85704
19
2.2
19
84
11
54
51
8
15
24
1.72
86608--86642
18
1.9
18
88
0
52
25
31
20
22
1.98
86624--86670
22
2.1
22
88
0
67
29
21
19
29
1.97
88148--88350
95
2.1
95
82
4
232
30
13
23
32
1.93
88690--89164
59
8.0
59
91
2
718
33
14
20
31
1.92

Tables:   1

The End!