Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006282.1 Hibiscus syriacus cultivar Beakdansim tig00014995_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45033

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1487--1525
20
2.0
19
85
14
53
35
12
2
48
1.55
5262--5312
22
2.4
21
83
6
66
27
21
13
37
1.91
5262--5333
23
3.3
22
88
5
101
26
20
15
37
1.92
5759--5797
20
2.1
19
86
13
55
15
0
10
74
1.07
7886--8006
54
2.2
54
91
0
188
32
26
19
22
1.97
14757--14895
64
2.2
65
85
1
181
27
17
25
29
1.98
14776--14935
65
2.5
65
87
1
223
27
15
25
31
1.96
14886--14933
19
2.6
17
77
9
51
25
14
29
31
1.95
14776--14982
65
3.2
63
80
8
211
27
16
24
31
1.96
23349--23383
18
2.0
17
88
5
52
31
11
22
34
1.90
23330--23468
64
2.2
65
84
1
172
27
17
25
30
1.97
23349--23508
65
2.5
65
85
1
205
27
15
25
31
1.95
23459--23506
19
2.6
17
77
9
51
25
14
31
29
1.95
32518--32575
29
2.0
29
100
0
116
20
34
10
34
1.87
34076--34116
15
2.7
15
100
0
82
60
0
0
39
0.96
34107--34167
28
2.2
27
82
5
77
52
11
0
36
1.38
41816--41895
21
3.8
21
80
8
81
22
36
25
16
1.94
41814--41875
20
3.0
20
83
9
79
20
35
25
17
1.95
41816--41895
20
3.8
20
76
14
63
22
36
25
16
1.94

Tables:   1

The End!