Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006283.1 Hibiscus syriacus cultivar Beakdansim tig00014996_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  92542

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8578--8642
31
2.1
31
85
0
85
24
18
23
33
1.96
8601--8697
30
3.2
30
86
1
104
22
19
24
32
1.97
8628--8700
30
2.4
30
93
0
119
24
19
24
31
1.98
13367--13439
30
2.4
30
95
0
128
24
17
24
32
1.97
22643--22727
41
2.1
41
86
4
118
23
31
23
21
1.98
23426--23450
12
2.1
12
100
0
50
8
28
48
16
1.74
40337--40567
118
2.0
118
81
3
277
42
12
22
22
1.86
42588--42617
2
15.0
2
100
0
60
50
0
0
50
1.00
42860--42907
24
2.0
24
83
0
60
62
2
6
29
1.31
42907--42964
21
2.6
22
81
13
66
68
3
5
22
1.24
61042--61186
49
2.9
49
80
10
177
24
16
22
36
1.94
61042--61226
99
1.9
99
82
8
234
22
16
23
36
1.94
62342--62736
171
2.3
169
86
3
524
26
16
19
36
1.94
62331--62738
85
4.8
85
88
3
527
26
16
20
36
1.94
67154--67189
16
2.2
16
90
9
56
75
0
13
11
1.06
68157--68185
12
2.3
13
94
5
51
68
6
0
24
1.13
70226--70280
23
2.4
22
78
6
56
58
1
3
36
1.26
70774--70824
23
2.2
23
96
0
93
41
7
7
43
1.63
70785--70837
23
2.3
23
83
0
61
47
5
3
43
1.45
72131--72161
16
1.9
16
93
0
53
22
19
19
38
1.93
79829--79858
2
15.0
2
100
0
60
50
0
0
50
1.00
80566--80606
21
2.0
21
90
0
64
51
0
9
39
1.35
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
81892--81993
37
2.8
37
82
4
125
41
15
11
31
1.83
82454--82571
22
5.3
21
70
18
71
31
5
1
61
1.30
82465--82555
19
4.6
19
70
17
60
31
4
2
61
1.28
82752--82787
18
1.9
19
88
5
56
30
5
0
63
1.17
82824--82850
2
13.5
2
100
0
54
48
0
0
51
1.00
82854--82883
4
7.2
4
92
7
51
23
3
0
73
0.98
82873--82913
15
2.6
16
81
14
50
14
7
0
78
0.96
87461--87531
19
3.6
19
75
7
54
77
5
12
4
1.09
88134--88209
22
3.5
22
92
0
125
40
26
11
21
1.87
88401--88463
24
2.6
24
87
2
99
38
19
1
41
1.61
88614--88674
32
1.9
32
87
9
90
32
11
19
36
1.88
89069--90197
106
10.7
106
89
3
1611
33
24
18
23
1.97
91460--91504
21
2.1
22
91
4
74
37
8
0
53
1.32
91536--91569
15
2.3
15
89
0
50
47
0
0
52
1.00
91535--91569
17
2.1
17
88
0
52
45
0
0
54
0.99
91743--91783
19
2.2
19
86
0
55
31
2
4
60
1.30
91803--91837
2
17.5
2
93
0
61
45
2
0
51
1.16
91851--91893
23
1.9
22
85
4
59
16
6
0
76
0.99

Tables:   1

The End!