Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000629.1 Hibiscus syriacus cultivar Beakdansim tig00001223_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64213

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2214--2246
14
2.2
16
89
10
52
33
21
12
33
1.90
5207--5277
7
10.1
7
85
0
97
43
35
0
21
1.53
12449--12576
48
2.7
48
82
2
159
29
30
17
22
1.96
14976--15057
2
41.5
2
97
2
157
50
0
0
50
1.00
17555--17638
37
2.3
38
81
10
102
45
17
13
23
1.84
17793--17830
18
2.1
18
90
0
58
26
18
21
34
1.96
18538--18841
57
5.3
57
80
5
364
40
18
8
33
1.81
18539--19811
114
11.8
109
82
7
1288
40
19
9
31
1.82
18803--18884
43
1.9
43
85
5
112
36
20
8
34
1.83
18846--19811
54
17.9
54
83
6
1109
40
19
9
30
1.83
26473--26559
6
14.5
6
95
0
156
81
17
1
0
0.75
37718--37763
23
2.0
23
91
0
74
28
26
23
21
1.99
41148--41185
19
2.1
19
90
5
60
68
2
5
23
1.23
41630--41717
45
2.0
45
86
4
124
36
19
10
34
1.85
41675--42639
54
17.9
54
83
5
1105
40
19
9
30
1.83
41675--42639
107
9.0
107
84
5
1099
40
19
9
30
1.83
53568--53621
12
4.6
12
83
2
56
25
38
0
35
1.57
53567--53621
24
2.3
23
81
3
74
27
38
0
34
1.57

Tables:   1

The End!