Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: VEPZ01006294.1 Hibiscus syriacus cultivar Beakdansim tig00015046_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 55434
ACGTcount: A:0.33, C:0.18, G:0.18, T:0.32
Found at i:76 original size:2 final size:2
Alignment explanation
Indices: 69--95 Score: 54
Period size: 2 Copynumber: 13.5 Consensus size: 2
59 TATTTTACCT
69 TA TA TA TA TA TA TA TA TA TA TA TA TA T
1 TA TA TA TA TA TA TA TA TA TA TA TA TA T
96 GTTGAATCAG
Statistics
Matches: 25, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 25 1.00
ACGTcount: A:0.48, C:0.00, G:0.00, T:0.52
Consensus pattern (2 bp):
TA
Found at i:9450 original size:25 final size:25
Alignment explanation
Indices: 9422--9507 Score: 66
Period size: 26 Copynumber: 3.2 Consensus size: 25
9412 AGCTTCACCT
9422 TTTCTCTCATAGCTTTTCTAAGCTA
1 TTTCTCTCATAGCTTTTCTAAGCTA
* * * *
9447 TTTCTCATCCTTGCTTTACTAAGCTT
1 TTTCTC-TCATAGCTTTTCTAAGCTA
*
9473 TTTCATTCTCTAATAG-TTTTGCTAAACTA
1 TTTC--TCTC--ATAGCTTTT-CTAAGCTA
9502 TTTCTC
1 TTTCTC
9508 ATTCTGATTT
Statistics
Matches: 46, Mismatches: 9, Indels: 10
0.71 0.14 0.15
Matches are distributed among these distances:
25 6 0.13
26 19 0.41
27 4 0.09
28 5 0.11
29 12 0.26
ACGTcount: A:0.20, C:0.23, G:0.07, T:0.50
Consensus pattern (25 bp):
TTTCTCTCATAGCTTTTCTAAGCTA
Found at i:15125 original size:3 final size:3
Alignment explanation
Indices: 15119--15176 Score: 64
Period size: 3 Copynumber: 19.0 Consensus size: 3
15109 TTAAATTTTT
* * *
15119 TTA TTA TTA TTA -AA TTTA TTA TTA CTAA ATA TTA TTA TTA TTA TTA
1 TTA TTA TTA TTA TTA -TTA TTA TTA -TTA TTA TTA TTA TTA TTA TTA
15165 TTA TTA TTA TTA
1 TTA TTA TTA TTA
15177 ATATATATAT
Statistics
Matches: 46, Mismatches: 6, Indels: 6
0.79 0.10 0.10
Matches are distributed among these distances:
2 1 0.02
3 42 0.91
4 3 0.07
ACGTcount: A:0.38, C:0.02, G:0.00, T:0.60
Consensus pattern (3 bp):
TTA
Found at i:15136 original size:15 final size:16
Alignment explanation
Indices: 15119--15182 Score: 87
Period size: 15 Copynumber: 4.1 Consensus size: 16
15109 TTAAATTTTT
15119 TTATTATTATTAAAT-
1 TTATTATTATTAAATA
*
15134 TTATTATTACTAAATA
1 TTATTATTATTAAATA
*
15150 TTATTATTATT-ATTA
1 TTATTATTATTAAATA
15165 TTATTATTATTAATATA
1 TTATTATTATTAA-ATA
15182 T
1 T
15183 ATATATATAT
Statistics
Matches: 42, Mismatches: 4, Indels: 4
0.84 0.08 0.08
Matches are distributed among these distances:
15 28 0.67
16 11 0.26
17 3 0.07
ACGTcount: A:0.39, C:0.02, G:0.00, T:0.59
Consensus pattern (16 bp):
TTATTATTATTAAATA
Found at i:15184 original size:2 final size:2
Alignment explanation
Indices: 15177--15210 Score: 68
Period size: 2 Copynumber: 17.0 Consensus size: 2
15167 ATTATTATTA
15177 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT
15211 TTTACAAGCC
Statistics
Matches: 32, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 32 1.00
ACGTcount: A:0.50, C:0.00, G:0.00, T:0.50
Consensus pattern (2 bp):
AT
Found at i:16630 original size:20 final size:21
Alignment explanation
Indices: 16584--16630 Score: 53
Period size: 20 Copynumber: 2.3 Consensus size: 21
16574 CTGCTTTTAA
*
16584 ATATATCGTTCTAATTGTATT
1 ATATATTGTTCTAATTGTATT
* *
16605 -TTTATTGTTTTAATTGT-TT
1 ATATATTGTTCTAATTGTATT
16624 ATATATT
1 ATATATT
16631 TAAATATTTT
Statistics
Matches: 21, Mismatches: 4, Indels: 3
0.75 0.14 0.11
Matches are distributed among these distances:
19 2 0.10
20 19 0.90
ACGTcount: A:0.26, C:0.04, G:0.09, T:0.62
Consensus pattern (21 bp):
ATATATTGTTCTAATTGTATT
Found at i:17335 original size:18 final size:18
Alignment explanation
Indices: 17314--17381 Score: 57
Period size: 18 Copynumber: 3.5 Consensus size: 18
17304 TTTTATATAC
17314 TTATTATTTTCATAGTAT
1 TTATTATTTTCATAGTAT
*
17332 TTATATATTTTCTTATTAATAT
1 TTAT-TATTTTC--A-TAGTAT
*
17354 TTCATTATTTGCA-AGTATT
1 TT-ATTATTTTCATAGTA-T
17373 TTATTATTT
1 TTATTATTT
17382 ACTTTTCTGT
Statistics
Matches: 41, Mismatches: 3, Indels: 12
0.73 0.05 0.21
Matches are distributed among these distances:
18 14 0.34
19 10 0.24
20 1 0.02
21 1 0.02
22 13 0.32
23 2 0.05
ACGTcount: A:0.28, C:0.06, G:0.04, T:0.62
Consensus pattern (18 bp):
TTATTATTTTCATAGTAT
Found at i:19726 original size:7 final size:7
Alignment explanation
Indices: 19691--19731 Score: 57
Period size: 7 Copynumber: 5.9 Consensus size: 7
19681 TTTTCATACA
19691 TGCATTT
1 TGCATTT
19698 T-CATTT
1 TGCATTT
19704 TGCATCTT
1 TGCAT-TT
19712 TGCATTT
1 TGCATTT
*
19719 TTCATTT
1 TGCATTT
19726 TGCATT
1 TGCATT
19732 CATACTTTTA
Statistics
Matches: 30, Mismatches: 2, Indels: 4
0.83 0.06 0.11
Matches are distributed among these distances:
6 6 0.20
7 17 0.57
8 7 0.23
ACGTcount: A:0.15, C:0.17, G:0.10, T:0.59
Consensus pattern (7 bp):
TGCATTT
Found at i:24225 original size:114 final size:114
Alignment explanation
Indices: 23885--24202 Score: 546
Period size: 114 Copynumber: 2.8 Consensus size: 114
23875 AAGTGCCATG
23885 TGCTCATAGTAGAAATAAGAAGACTCAATAGCATCTTCTGGAAGTGTTCTTTGAGTTATCTGATC
1 TGCTCATAGTAGAAATAAGAAGACTCAATAGCATCTTCTGGAAGTGTTCTTTGAGTTATCTGATC
*
23950 TGGTTTGGTATGAACCCCAAAAACCAATCATTGGATTTTAAAGATGAATT
66 TGGTTTGGTATGAACCCC-AAAACCAATCATTGGATTTAAAAGATGAATT
24000 TGCTCATAGTAGAAATAAGAAGACTCAATAGCATCTTCTGGAAGTGTTCTTTGAGTTATCTGATC
1 TGCTCATAGTAGAAATAAGAAGACTCAATAGCATCTTCTGGAAGTGTTCTTTGAGTTATCTGATC
*
24065 TGGTTTGGTATGAACCCTAAAACCAATCATTGGATTTAAAAGATGAATT
66 TGGTTTGGTATGAACCCCAAAACCAATCATTGGATTTAAAAGATGAATT
* * *
24114 TGCTCATAGTAGAAATAAGGAGACCCAATAGCATATTCTGGAAGTGTTCTTTGAGTTATCTGATC
1 TGCTCATAGTAGAAATAAGAAGACTCAATAGCATCTTCTGGAAGTGTTCTTTGAGTTATCTGATC
* * * *
24179 TGATTCGGTAGGAACCCCAGAACC
66 TGGTTTGGTATGAACCCCAAAACC
24203 GATTTATGGA
Statistics
Matches: 193, Mismatches: 10, Indels: 1
0.95 0.05 0.00
Matches are distributed among these distances:
114 111 0.58
115 82 0.42
ACGTcount: A:0.32, C:0.16, G:0.20, T:0.32
Consensus pattern (114 bp):
TGCTCATAGTAGAAATAAGAAGACTCAATAGCATCTTCTGGAAGTGTTCTTTGAGTTATCTGATC
TGGTTTGGTATGAACCCCAAAACCAATCATTGGATTTAAAAGATGAATT
Found at i:26817 original size:22 final size:22
Alignment explanation
Indices: 26788--26842 Score: 92
Period size: 22 Copynumber: 2.5 Consensus size: 22
26778 ATCTACACTC
26788 TTCAAAGATGATAGATTCTCTT
1 TTCAAAGATGATAGATTCTCTT
*
26810 TTTAAAGATGATAGATTCTCTT
1 TTCAAAGATGATAGATTCTCTT
*
26832 TTCAAAAATGA
1 TTCAAAGATGA
26843 AAGCTTTATG
Statistics
Matches: 30, Mismatches: 3, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
22 30 1.00
ACGTcount: A:0.36, C:0.11, G:0.13, T:0.40
Consensus pattern (22 bp):
TTCAAAGATGATAGATTCTCTT
Found at i:27600 original size:76 final size:76
Alignment explanation
Indices: 27289--27932 Score: 1209
Period size: 76 Copynumber: 8.5 Consensus size: 76
27279 CTATTTCCCA
*
27289 CATCTGTAAGTCCTTCAGTGCATGATGTTTCCAAAAAGCCTTCGGGATCTTTTTGATGTTTTCAA
1 CATCTGTAAGTCCTTCAGTGCATGATGTTTCCAAAAAGCCTTCGGGAGCTTTTTGATGTTTTCAA
27354 AGCCTTAGGGT
66 AGCCTTAGGGT
27365 CATCTGTAAGTCCTTCAGTGCATGATGTTTTCCAAAAAGCCTTCGGGAGCTTTTTGATGTTTTCA
1 CATCTGTAAGTCCTTCAGTGCATGATG-TTTCCAAAAAGCCTTCGGGAGCTTTTTGATGTTTTCA
27430 AAGCCTTAGGGT
65 AAGCCTTAGGGT
27442 CATCTGTAAGTCCTTCAGTGCATGATGTTTCC-AAAAGCCTTCGGGAGCTTTTTGATGTTTTCAA
1 CATCTGTAAGTCCTTCAGTGCATGATGTTTCCAAAAAGCCTTCGGGAGCTTTTTGATGTTTTCAA
27506 AGCCTTAGGGT
66 AGCCTTAGGGT
*
27517 CATCTGTAAGTCCTTCAGTGCATGATGTTTCCAAAAAGCCTTCGGGATCTTTTTGATGTTTTCAA
1 CATCTGTAAGTCCTTCAGTGCATGATGTTTCCAAAAAGCCTTCGGGAGCTTTTTGATGTTTTCAA
27582 AGCCTTAGGGT
66 AGCCTTAGGGT
*
27593 CATCTGTAAGTCCTTCAGTGCATGATGTTTCCAAAAAGCCTTCGGGATCTTTTTGATGTTTTCAA
1 CATCTGTAAGTCCTTCAGTGCATGATGTTTCCAAAAAGCCTTCGGGAGCTTTTTGATGTTTTCAA
27658 AGCCTTAGGGT
66 AGCCTTAGGGT
27669 CATCTGTAAGTCCTTCAGTGCATGATGTTTTCCAAAAAGCCTTCGGGAGCTTTTTGATGTTTTCA
1 CATCTGTAAGTCCTTCAGTGCATGATG-TTTCCAAAAAGCCTTCGGGAGCTTTTTGATGTTTTCA
27734 AAGCCTTAGGGT
65 AAGCCTTAGGGT
27746 CATCTGTAAGTCCTTCAGTGCATGATGTTTCCAAAAAGCCTTCGGGAGCTTTTTGATGTTTTCAA
1 CATCTGTAAGTCCTTCAGTGCATGATGTTTCCAAAAAGCCTTCGGGAGCTTTTTGATGTTTTCAA
27811 AGCCTTAGGGT
66 AGCCTTAGGGT
27822 CATCTGTAAGTCCTTCAGTGCATGATGTTTCCAAAAAGCCTTCGGGAGCTTTTTGATGTTTTCAA
1 CATCTGTAAGTCCTTCAGTGCATGATGTTTCCAAAAAGCCTTCGGGAGCTTTTTGATGTTTTCAA
*
27887 AGCCTTCGGGT
66 AGCCTTAGGGT
* *
27898 CATCTGTAAGCCCTTCAGTGCATGATGTTTTCAAA
1 CATCTGTAAGTCCTTCAGTGCATGATGTTTCCAAA
27933 CATTTCCATC
Statistics
Matches: 559, Mismatches: 6, Indels: 6
0.98 0.01 0.01
Matches are distributed among these distances:
75 75 0.13
76 334 0.60
77 150 0.27
ACGTcount: A:0.22, C:0.20, G:0.22, T:0.36
Consensus pattern (76 bp):
CATCTGTAAGTCCTTCAGTGCATGATGTTTCCAAAAAGCCTTCGGGAGCTTTTTGATGTTTTCAA
AGCCTTAGGGT
Found at i:27818 original size:229 final size:228
Alignment explanation
Indices: 27289--27929 Score: 1221
Period size: 229 Copynumber: 2.8 Consensus size: 228
27279 CTATTTCCCA
27289 CATCTGTAAGTCCTTCAGTGCATGATGTTTCCAAAAAGCCTTCGGGATCTTTTTGATGTTTTCAA
1 CATCTGTAAGTCCTTCAGTGCATGATGTTTCCAAAAAGCCTTCGGGATCTTTTTGATGTTTTCAA
27354 AGCCTTAGGGTCATCTGTAAGTCCTTCAGTGCATGATGTTTTCCAAAAAGCCTTCGGGAGCTTTT
66 AGCCTTAGGGTCATCTGTAAGTCCTTCAGTGCATGATG-TTTCCAAAAAGCCTTCGGGAGCTTTT
27419 TGATGTTTTCAAAGCCTTAGGGTCATCTGTAAGTCCTTCAGTGCATGATG-TTTCCAAAAGCCTT
130 TGATGTTTTCAAAGCCTTAGGGTCATCTGTAAGTCCTTCAGTGCATGATGTTTTCCAAAAGCCTT
27483 CGGGAGCTTTTTGATGTTTTCAAAGCCTTAGGGT
195 CGGGAGCTTTTTGATGTTTTCAAAGCCTTAGGGT
27517 CATCTGTAAGTCCTTCAGTGCATGATGTTTCCAAAAAGCCTTCGGGATCTTTTTGATGTTTTCAA
1 CATCTGTAAGTCCTTCAGTGCATGATGTTTCCAAAAAGCCTTCGGGATCTTTTTGATGTTTTCAA
*
27582 AGCCTTAGGGTCATCTGTAAGTCCTTCAGTGCATGATGTTTCCAAAAAGCCTTCGGGATCTTTTT
66 AGCCTTAGGGTCATCTGTAAGTCCTTCAGTGCATGATGTTTCCAAAAAGCCTTCGGGAGCTTTTT
27647 GATGTTTTCAAAGCCTTAGGGTCATCTGTAAGTCCTTCAGTGCATGATGTTTTCCAAAAAGCCTT
131 GATGTTTTCAAAGCCTTAGGGTCATCTGTAAGTCCTTCAGTGCATGATGTTTTCC-AAAAGCCTT
27712 CGGGAGCTTTTTGATGTTTTCAAAGCCTTAGGGT
195 CGGGAGCTTTTTGATGTTTTCAAAGCCTTAGGGT
*
27746 CATCTGTAAGTCCTTCAGTGCATGATGTTTCCAAAAAGCCTTCGGGAGCTTTTTGATGTTTTCAA
1 CATCTGTAAGTCCTTCAGTGCATGATGTTTCCAAAAAGCCTTCGGGATCTTTTTGATGTTTTCAA
27811 AGCCTTAGGGTCATCTGTAAGTCCTTCAGTGCATGATGTTTCCAAAAAGCCTTCGGGAGCTTTTT
66 AGCCTTAGGGTCATCTGTAAGTCCTTCAGTGCATGATGTTTCCAAAAAGCCTTCGGGAGCTTTTT
* *
27876 GATGTTTTCAAAGCCTTCGGGTCATCTGTAAGCCCTTCAGTGCATGATGTTTTC
131 GATGTTTTCAAAGCCTTAGGGTCATCTGTAAGTCCTTCAGTGCATGATGTTTTC
27930 AAACATTTCC
Statistics
Matches: 406, Mismatches: 5, Indels: 3
0.98 0.01 0.01
Matches are distributed among these distances:
227 75 0.18
228 108 0.27
229 223 0.55
ACGTcount: A:0.22, C:0.20, G:0.22, T:0.36
Consensus pattern (228 bp):
CATCTGTAAGTCCTTCAGTGCATGATGTTTCCAAAAAGCCTTCGGGATCTTTTTGATGTTTTCAA
AGCCTTAGGGTCATCTGTAAGTCCTTCAGTGCATGATGTTTCCAAAAAGCCTTCGGGAGCTTTTT
GATGTTTTCAAAGCCTTAGGGTCATCTGTAAGTCCTTCAGTGCATGATGTTTTCCAAAAGCCTTC
GGGAGCTTTTTGATGTTTTCAAAGCCTTAGGGT
Found at i:28066 original size:3 final size:3
Alignment explanation
Indices: 28060--28111 Score: 52
Period size: 3 Copynumber: 17.0 Consensus size: 3
28050 CATTTAAATT
* * *
28060 TTA TTA TTA TTA TTA -AA TTTA TTA TTA CTAA ATA TTA TTA TTA TTA
1 TTA TTA TTA TTA TTA TTA -TTA TTA TTA -TTA TTA TTA TTA TTA TTA
28106 TTA TTA
1 TTA TTA
28112 ATATATATAT
Statistics
Matches: 40, Mismatches: 6, Indels: 6
0.77 0.12 0.12
Matches are distributed among these distances:
2 1 0.03
3 36 0.90
4 3 0.08
ACGTcount: A:0.38, C:0.02, G:0.00, T:0.60
Consensus pattern (3 bp):
TTA
Found at i:28119 original size:25 final size:27
Alignment explanation
Indices: 28064--28119 Score: 71
Period size: 25 Copynumber: 2.1 Consensus size: 27
28054 TAAATTTTAT
*
28064 TATTATTATTAAATTTATTATTACTAAA
1 TATTATTATT-AATTTATTATTAATAAA
*
28092 TATTATTATT-A-TTATTATTAATATA
1 TATTATTATTAATTTATTATTAATAAA
28117 TAT
1 TAT
28120 ATATATATAT
Statistics
Matches: 26, Mismatches: 2, Indels: 3
0.84 0.06 0.10
Matches are distributed among these distances:
25 15 0.58
26 1 0.04
28 10 0.38
ACGTcount: A:0.41, C:0.02, G:0.00, T:0.57
Consensus pattern (27 bp):
TATTATTATTAATTTATTATTAATAAA
Found at i:29555 original size:20 final size:21
Alignment explanation
Indices: 29509--29555 Score: 53
Period size: 20 Copynumber: 2.3 Consensus size: 21
29499 CTGCTTTTAA
*
29509 ATATATCGTTCTAATTGTATT
1 ATATATTGTTCTAATTGTATT
* *
29530 -TTTATTGTTTTAATTGT-TT
1 ATATATTGTTCTAATTGTATT
29549 ATATATT
1 ATATATT
29556 TAAATATTTT
Statistics
Matches: 21, Mismatches: 4, Indels: 3
0.75 0.14 0.11
Matches are distributed among these distances:
19 2 0.10
20 19 0.90
ACGTcount: A:0.26, C:0.04, G:0.09, T:0.62
Consensus pattern (21 bp):
ATATATTGTTCTAATTGTATT
Found at i:33599 original size:18 final size:18
Alignment explanation
Indices: 33576--33612 Score: 56
Period size: 18 Copynumber: 2.1 Consensus size: 18
33566 CGATCGTCAG
*
33576 TATTTTTTATTATTTTTT
1 TATTTTCTATTATTTTTT
*
33594 TATTTTCTCTTATTTTTT
1 TATTTTCTATTATTTTTT
33612 T
1 T
33613 TTATTTTCAA
Statistics
Matches: 17, Mismatches: 2, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
18 17 1.00
ACGTcount: A:0.14, C:0.05, G:0.00, T:0.81
Consensus pattern (18 bp):
TATTTTCTATTATTTTTT
Found at i:33613 original size:20 final size:21
Alignment explanation
Indices: 33582--33620 Score: 71
Period size: 20 Copynumber: 1.9 Consensus size: 21
33572 TCAGTATTTT
33582 TTATTATTTTTTTATTTTCTC
1 TTATTATTTTTTTATTTTCTC
33603 TTATT-TTTTTTTATTTTC
1 TTATTATTTTTTTATTTTC
33621 AATAAGTATG
Statistics
Matches: 18, Mismatches: 0, Indels: 1
0.95 0.00 0.05
Matches are distributed among these distances:
20 13 0.72
21 5 0.28
ACGTcount: A:0.13, C:0.08, G:0.00, T:0.79
Consensus pattern (21 bp):
TTATTATTTTTTTATTTTCTC
Found at i:35792 original size:2 final size:2
Alignment explanation
Indices: 35785--35811 Score: 54
Period size: 2 Copynumber: 13.5 Consensus size: 2
35775 ACTCAGAGGG
35785 TA TA TA TA TA TA TA TA TA TA TA TA TA T
1 TA TA TA TA TA TA TA TA TA TA TA TA TA T
35812 TAATAAGACG
Statistics
Matches: 25, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 25 1.00
ACGTcount: A:0.48, C:0.00, G:0.00, T:0.52
Consensus pattern (2 bp):
TA
Found at i:53000 original size:22 final size:23
Alignment explanation
Indices: 52951--53010 Score: 59
Period size: 22 Copynumber: 2.7 Consensus size: 23
52941 ATACGTTGGT
*
52951 AAACGTTAAACAAATATATTAAC
1 AAACATTAAACAAATATATTAAC
* * * *
52974 GAACA-TAAACAAATATGTTTAT
1 AAACATTAAACAAATATATTAAC
*
52996 AAACATTAAATAAAT
1 AAACATTAAACAAAT
53011 TAAACACAAA
Statistics
Matches: 29, Mismatches: 7, Indels: 2
0.76 0.18 0.05
Matches are distributed among these distances:
22 18 0.62
23 11 0.38
ACGTcount: A:0.57, C:0.10, G:0.05, T:0.28
Consensus pattern (23 bp):
AAACATTAAACAAATATATTAAC
Found at i:55285 original size:24 final size:26
Alignment explanation
Indices: 55253--55316 Score: 71
Period size: 26 Copynumber: 2.5 Consensus size: 26
55243 TACGTGGCTT
55253 GCCATGCACAACCC-A-C-CATAGGTC
1 GCCATGCAC-ACCCGACCTCATAGGTC
* *
55277 GCCATGCACTCCCGACCTCCTAGGTC
1 GCCATGCACACCCGACCTCATAGGTC
*
55303 GCCATGCACGCCCG
1 GCCATGCACACCCG
55317 GCGACCAAGG
Statistics
Matches: 34, Mismatches: 3, Indels: 4
0.83 0.07 0.10
Matches are distributed among these distances:
23 3 0.09
24 10 0.29
25 1 0.03
26 20 0.59
ACGTcount: A:0.20, C:0.45, G:0.20, T:0.14
Consensus pattern (26 bp):
GCCATGCACACCCGACCTCATAGGTC
Done.