Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006298.1 Hibiscus syriacus cultivar Beakdansim tig00015056_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58508

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8396--8446
18
2.8
18
90
0
84
31
35
17
15
1.92
14936--15083
36
4.1
36
91
1
233
43
15
14
25
1.85
14936--15083
72
2.0
74
96
2
273
43
15
14
25
1.85
18796--18948
77
2.0
78
87
2
220
55
7
7
28
1.56
20557--20628
23
3.2
24
69
25
59
33
0
2
63
1.08
22148--22188
21
2.0
21
85
0
55
31
31
19
17
1.95
22521--22591
6
11.8
6
96
0
124
19
0
46
33
1.50
26957--27441
228
2.1
227
94
1
855
44
8
7
39
1.62
27720--27766
20
2.4
19
89
10
76
55
10
17
17
1.69
27508--27980
181
2.6
182
90
1
707
42
14
17
26
1.87
27901--27947
20
2.4
19
82
10
67
53
10
17
19
1.72
27910--27952
20
2.3
19
88
11
63
51
11
16
20
1.75
29238--29282
3
15.0
3
85
0
63
37
2
33
26
1.69
30784--31275
183
2.7
182
95
1
867
34
14
17
33
1.90
33743--33807
25
2.6
25
80
0
85
35
9
13
41
1.77
34154--34203
23
2.2
23
88
0
73
34
4
24
38
1.74
34620--34667
23
2.1
23
88
0
69
37
18
8
35
1.81
37181--37213
17
2.0
17
88
5
50
39
0
0
60
0.97
41082--41178
49
2.0
49
89
2
151
40
20
8
30
1.82

Tables:   1

The End!