Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006308.1 Hibiscus syriacus cultivar Beakdansim tig00015072_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56335

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1872--1920
19
2.6
19
100
0
98
55
8
0
36
1.30
13307--13337
15
2.1
15
93
0
53
9
38
32
19
1.84
17221--17283
31
2.1
30
85
8
85
41
7
22
28
1.82
29325--29353
7
4.1
7
100
0
58
41
0
58
0
0.98
32293--32345
21
2.5
21
96
0
97
28
28
24
18
1.98
32353--32647
21
14.3
21
67
24
148
21
19
23
35
1.96
32379--32638
82
3.2
82
96
0
475
20
19
24
36
1.95
32379--32638
42
6.3
42
95
3
467
20
19
24
36
1.95
32719--32761
21
2.0
21
95
0
77
41
32
11
13
1.81
33382--33437
21
2.7
20
79
15
60
37
19
21
21
1.94
33401--33456
21
2.8
20
81
10
69
37
19
21
21
1.94
36826--36901
36
2.1
36
85
7
100
47
1
3
47
1.29
37047--37084
20
1.9
20
88
0
58
21
26
10
42
1.85
42864--42905
17
2.5
17
84
7
50
59
2
0
38
1.10
52840--52997
51
3.1
51
86
0
208
18
36
12
32
1.88

Tables:   1

The End!