Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006317.1 Hibiscus syriacus cultivar Beakdansim tig00015095_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69847

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--94
31
3.0
31
93
3
154
19
19
23
38
1.93
1130--1207
24
3.7
22
75
20
69
32
19
26
21
1.97
2004--2044
21
2.0
21
85
9
57
41
2
19
36
1.65
2697--2746
20
2.6
19
87
6
66
18
24
30
28
1.97
7480--7539
23
2.6
23
83
0
75
45
6
11
36
1.67
10060--10091
12
2.6
13
85
14
50
40
0
3
56
1.15
11257--11299
21
2.0
21
81
0
50
30
30
25
13
1.94
11843--12146
149
2.0
149
98
0
581
27
15
20
36
1.93
18216--18258
21
2.0
21
81
0
50
30
30
25
13
1.94
18238--18390
68
2.2
68
97
0
288
30
28
26
15
1.96
18869--19172
149
2.0
149
98
0
581
26
15
20
36
1.93
20689--20730
14
2.9
15
75
7
50
47
7
2
42
1.43
20805--20848
23
1.9
23
90
0
70
36
6
2
54
1.40
20865--20939
31
2.4
31
79
18
93
52
1
1
45
1.17
20961--20990
15
1.9
16
93
6
53
46
0
3
50
1.18
21039--21113
29
2.6
30
87
6
109
64
2
4
29
1.26
34562--34603
15
2.8
15
81
0
57
11
28
0
59
1.33
34806--34858
18
2.9
19
75
11
65
0
32
15
52
1.42
45610--45715
53
2.0
54
88
1
160
53
8
5
32
1.54
48038--48577
270
2.0
270
97
0
1026
35
16
24
23
1.95
55667--55696
15
2.0
15
93
0
51
30
33
20
16
1.94
68170--68224
10
5.6
10
72
10
51
61
0
0
38
0.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
68168--68224
25
2.3
23
75
18
62
61
0
0
38
0.96
68162--68221
29
2.1
29
87
6
88
60
0
0
40
0.97
69113--69190
34
2.3
34
88
6
122
44
24
0
30
1.54
69129--69206
34
2.3
33
84
8
102
43
29
1
25
1.63

Tables:   1

The End!