Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000632.1 Hibiscus syriacus cultivar Beakdansim tig00001228_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71068

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1139--1219
18
4.4
18
78
9
76
22
18
33
25
1.97
11220--11275
21
2.8
18
79
15
58
75
7
14
3
1.16
16431--16502
36
2.0
37
89
8
112
25
16
31
26
1.96
16437--16507
18
3.9
18
81
9
83
23
16
32
26
1.96
38697--38736
21
1.9
21
89
0
62
10
25
40
25
1.86
47134--47179
20
2.3
20
96
0
83
50
13
28
8
1.70
47371--47395
6
4.2
6
100
0
50
36
32
16
16
1.90
54896--54921
2
13.0
2
100
0
52
50
0
0
50
1.00
56987--57015
3
9.7
3
100
0
58
65
0
34
0
0.93
65613--65656
20
2.2
20
84
4
63
65
0
15
18
1.27

Tables:   1

The End!