Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006325.1 Hibiscus syriacus cultivar Beakdansim tig00015115_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63107

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5661--5701
16
2.6
16
100
0
82
39
24
14
21
1.91
6805--6943
36
3.9
36
90
0
224
25
16
15
41
1.88
8183--8238
26
2.2
26
96
0
103
30
16
28
25
1.96
43780--43823
22
2.0
22
100
0
88
22
18
27
31
1.97
44682--45021
137
2.4
140
86
9
446
30
14
17
37
1.90
50697--50813
20
5.8
20
91
2
180
26
21
37
14
1.92
50697--50813
41
2.9
40
90
1
180
26
21
37
14
1.92
50697--50813
61
1.9
60
91
1
189
26
21
37
14
1.92
54267--54313
19
2.4
20
89
3
69
23
23
29
23
1.99
54458--58396
917
4.3
914
90
2
6113
31
16
15
37
1.89
57909--57940
14
2.3
15
89
10
50
75
0
0
25
0.81
58747--58782
19
1.9
18
88
5
54
58
0
2
38
1.13

Tables:   1

The End!