Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006329.1 Hibiscus syriacus cultivar Beakdansim tig00015128_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45903

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
259--401
2
71.5
2
100
0
286
49
0
50
0
1.00
13045--13111
14
4.4
14
77
20
71
23
38
29
7
1.82
13042--13129
34
2.5
37
88
7
137
23
35
29
11
1.90
13059--13092
10
3.4
10
84
15
52
23
38
29
8
1.85
13093--13177
33
2.6
33
88
3
118
25
27
38
8
1.84
13181--13236
29
1.9
29
92
0
94
19
28
37
14
1.91
21766--21810
20
2.2
20
100
0
90
35
8
31
24
1.86
21773--21819
20
2.3
20
92
0
76
42
8
25
23
1.82
22618--22666
9
5.7
9
83
9
66
14
0
8
77
0.98
23473--23531
31
2.0
29
86
6
82
61
5
8
25
1.46
25966--26005
21
1.9
21
85
10
55
60
0
12
27
1.33
26537--26582
6
8.0
6
79
15
53
19
30
32
17
1.95
26537--26582
23
2.0
23
87
8
67
19
30
32
17
1.95
26537--26586
17
2.9
17
82
11
66
20
32
30
18
1.96
28494--28518
2
12.5
2
100
0
50
48
0
0
52
1.00
30683--30724
16
2.5
17
77
14
52
54
2
0
42
1.13
40387--40426
21
2.0
20
95
5
71
30
17
15
37
1.90
41270--41324
27
2.0
27
93
6
94
36
1
1
60
1.18
41425--41471
24
2.0
24
87
8
69
44
0
2
53
1.12
41548--41580
13
2.4
14
85
10
50
51
6
9
33
1.58
42592--42660
21
3.4
21
66
18
56
36
26
17
20
1.94
42563--42654
39
2.3
42
88
5
136
38
23
16
21
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42669--42721
21
2.5
21
93
0
88
18
22
30
28
1.98

Tables:   1

The End!