Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006331.1 Hibiscus syriacus cultivar Beakdansim tig00015132_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73480

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2297--2351
20
3.0
18
85
12
76
20
18
10
50
1.76
2304--2342
20
2.0
20
100
0
78
23
20
10
46
1.81
2291--2357
20
3.8
18
81
12
50
22
19
10
47
1.79
13954--13996
16
2.6
16
85
3
59
69
6
16
6
1.32
18879--18914
2
18.0
2
100
0
72
50
0
0
50
1.00
27215--27248
16
2.1
17
88
5
52
32
0
17
50
1.47
32273--32331
29
2.0
29
100
0
118
49
13
13
23
1.78
32662--32706
17
2.6
18
76
20
51
35
0
15
48
1.45
48035--48069
16
2.1
17
94
5
63
34
8
22
34
1.85
52982--53011
2
15.0
2
100
0
60
50
0
0
50
1.00
53235--53314
35
2.3
35
84
4
99
43
22
1
32
1.61
53496--53789
148
2.0
149
91
0
482
34
7
9
48
1.64
54291--54370
35
2.3
35
93
0
133
32
0
23
43
1.54
55286--55358
33
2.2
32
87
2
101
42
0
0
57
0.98
67828--67857
15
2.0
15
93
0
51
16
20
33
30
1.94

Tables:   1

The End!