Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000634.1 Hibiscus syriacus cultivar Beakdansim tig00001230_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63093

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3167--3200
13
2.6
13
95
0
59
41
23
17
17
1.90
3532--3567
3
12.3
3
94
5
65
30
0
0
69
0.89
16563--16623
31
2.0
31
93
6
106
22
16
19
40
1.90
21060--21142
21
3.9
21
75
7
69
14
22
36
26
1.93
21105--21142
20
1.9
20
88
0
58
13
26
36
23
1.91
24931--24977
21
2.3
21
85
10
62
38
6
2
53
1.39
37331--37383
22
2.5
20
80
17
61
45
0
1
52
1.11
43648--43682
16
2.3
15
90
5
52
28
11
5
54
1.59
45636--46463
183
4.5
183
87
1
1041
44
13
14
27
1.82
47930--48001
36
2.0
36
91
0
117
22
9
41
26
1.84
55204--55242
21
1.9
21
94
5
71
41
10
10
38
1.73
55500--56766
199
6.4
198
87
2
1736
39
13
15
31
1.87
56740--56786
20
2.3
20
100
0
94
46
4
14
34
1.64
56740--56794
20
2.8
20
94
0
83
45
7
16
30
1.74
56828--56871
20
2.2
20
83
4
52
29
9
9
52
1.64
57152--57210
18
3.5
16
78
17
66
22
42
5
30
1.75
59715--59772
30
1.9
30
86
6
82
29
3
15
51
1.60
59722--59776
24
2.3
24
87
3
76
30
3
16
49
1.63
61208--62376
200
5.9
199
90
2
1656
38
14
15
31
1.88
62295--62332
20
1.9
20
94
0
67
26
13
10
50
1.73

Tables:   1

The End!