Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006341.1 Hibiscus syriacus cultivar Beakdansim tig00015156_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61147

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2327--2391
3
22.0
3
74
14
55
43
0
0
56
0.99
2328--2381
16
3.6
16
87
7
69
44
0
0
55
0.99
2327--2395
36
2.0
33
86
8
93
44
0
0
55
0.99
9856--9964
17
6.7
15
76
20
87
80
1
17
0
0.79
9858--9950
26
3.6
26
79
15
95
79
2
18
0
0.83
9856--9965
34
3.3
34
83
11
129
80
1
17
0
0.79
9871--9974
8
12.6
8
75
18
90
82
1
14
0
0.80
9879--9976
4
20.0
5
71
26
68
81
2
15
1
0.84
9871--9976
10
11.7
9
79
15
112
82
1
15
0
0.82
14534--14588
22
2.5
22
93
0
101
34
10
14
40
1.81
15240--16402
76
15.4
76
97
0
2140
23
20
22
33
1.97
21104--21141
16
2.5
15
87
8
51
50
0
2
47
1.15
21489--21529
12
3.6
12
78
21
52
9
39
0
51
1.35
21487--21528
22
1.9
23
90
9
70
9
38
0
52
1.34
22156--22193
20
1.9
20
94
0
67
36
15
15
31
1.90
25572--25624
16
3.2
16
72
5
52
41
26
1
30
1.66
25794--25862
23
3.0
23
82
0
84
27
26
24
21
1.99
25878--26198
103
3.1
103
96
0
579
36
23
14
26
1.93
26717--26746
15
2.0
15
93
0
51
36
10
0
53
1.35
27672--27716
21
2.1
21
91
0
72
15
22
28
33
1.95
32160--32210
21
2.4
21
100
0
102
25
15
21
37
1.93
33663--33721
25
2.5
24
77
5
66
45
18
23
11
1.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33956--34097
47
3.2
46
62
19
109
35
9
4
51
1.53
33929--34095
88
1.9
88
94
0
298
36
8
3
50
1.51
40924--41176
98
2.7
96
82
6
327
28
15
27
28
1.96
41181--41565
91
4.2
91
89
2
558
23
20
16
38
1.92
41181--41565
181
2.1
182
88
2
560
23
20
16
38
1.92
41990--42026
2
18.5
2
100
0
74
51
0
0
48
1.00
42407--42450
21
2.2
20
91
4
70
36
11
0
52
1.38
42936--42978
19
2.2
20
84
12
54
60
9
0
30
1.28
47029--47077
24
2.0
24
100
0
98
46
16
12
24
1.81
48148--48193
2
23.0
2
100
0
92
50
0
0
50
1.00
51842--51876
18
1.9
18
88
0
52
28
17
0
54
1.43
56613--56710
22
4.4
23
74
15
89
34
25
21
18
1.96
56646--56710
24
2.8
24
88
4
89
33
26
23
16
1.96
57143--57196
2
27.0
2
100
0
108
50
0
0
50
1.00
58906--58947
22
1.9
22
95
0
75
26
28
19
26
1.98

Tables:   1

The End!