Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006355.1 Hibiscus syriacus cultivar Beakdansim tig00015233_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67323

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1327--1365
20
2.0
19
95
5
69
28
25
15
30
1.96
11348--11377
5
6.0
5
96
0
51
76
0
3
20
0.92
11479--11503
12
2.1
12
100
0
50
68
0
0
32
0.90
12253--12449
85
2.3
83
82
6
220
53
12
2
31
1.50
13779--13820
20
2.2
20
83
12
52
30
16
2
50
1.58
15830--15866
19
1.9
19
88
0
56
48
13
21
16
1.80
18069--18093
7
3.6
7
100
0
50
40
0
60
0
0.97
19043--19190
32
4.6
32
73
3
109
33
17
13
35
1.89
22421--22477
23
2.5
23
85
5
80
14
28
5
52
1.62
22998--23050
17
3.2
16
75
17
54
73
0
1
24
0.93
24233--24371
66
2.1
66
80
4
156
48
9
12
29
1.73
25158--25188
2
15.5
2
100
0
62
48
0
0
51
1.00
27508--27582
19
3.9
19
68
3
51
41
1
0
57
1.07
27508--27582
27
2.6
29
75
10
82
41
1
0
57
1.07
41138--41172
18
1.9
18
88
0
52
11
8
48
31
1.69
52820--53114
119
2.5
115
82
8
366
23
13
22
41
1.89
57795--57836
13
3.2
13
89
3
57
33
0
2
64
1.07
64076--64489
54
7.6
54
80
6
410
31
10
19
38
1.85
64076--64546
108
4.3
109
78
7
431
32
10
18
38
1.85
64076--64463
163
2.4
160
84
6
480
32
10
18
38
1.84
65207--65476
117
2.3
116
81
5
314
38
12
19
28
1.89
66416--66464
24
2.0
24
84
0
62
48
14
14
22
1.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
66433--66547
24
4.8
24
87
8
146
41
18
17
22
1.90
66433--66564
48
2.8
48
79
9
153
43
18
15
21
1.87

Tables:   1

The End!