Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006359.1 Hibiscus syriacus cultivar Beakdansim tig00015244_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39438

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
423--513
3
30.0
3
80
12
98
62
0
1
36
1.02
423--513
23
4.1
23
81
14
102
62
0
1
36
1.02
446--524
37
2.1
37
84
9
99
64
1
2
31
1.15
440--535
43
2.2
43
84
5
120
65
1
2
31
1.11
755--811
16
3.4
16
77
13
69
19
21
8
50
1.74
873--1182
121
2.6
119
87
7
446
27
17
13
40
1.88
1884--1982
49
1.9
52
86
8
141
29
21
14
35
1.92
2441--2488
17
2.5
19
77
19
55
60
2
8
29
1.37
2829--2886
9
6.3
9
84
8
73
10
5
0
84
0.77
2842--2886
19
2.4
19
92
7
74
11
2
0
86
0.65
13008--13228
46
4.8
46
92
2
354
28
14
20
36
1.92
14871--14916
24
1.9
23
86
8
65
50
6
21
21
1.71
22906--22983
17
4.2
17
66
23
50
70
0
20
8
1.14
22970--23028
29
2.0
29
81
12
68
79
0
11
8
0.93
22991--23043
20
2.6
20
82
8
63
79
0
13
7
0.93
24361--24726
55
6.7
56
83
6
317
26
17
25
30
1.97
24359--24727
110
3.4
109
78
7
356
26
17
25
30
1.97
24516--24753
55
4.3
55
77
11
211
28
18
23
29
1.98
24516--24753
110
2.2
110
81
6
284
28
18
23
29
1.98
31192--31219
8
3.5
8
100
0
56
64
0
0
35
0.94
33398--33474
3
26.0
3
79
12
88
64
0
0
35
0.93
39259--39438
88
2.1
87
90
3
281
31
22
7
38
1.81
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
39259--39438
45
4.1
44
90
5
267
31
22
7
38
1.81

Tables:   1

The End!