Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006360.1 Hibiscus syriacus cultivar Beakdansim tig00015249_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48746

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
399--459
21
2.9
21
92
4
97
14
9
36
39
1.80
901--950
20
2.7
19
79
11
59
52
12
12
24
1.72
7548--7581
17
1.9
17
88
5
50
47
14
0
38
1.45
18302--18356
27
2.0
27
82
10
67
29
0
25
45
1.54
19198--19581
55
7.0
55
93
0
624
33
11
18
35
1.87
20236--20265
16
1.9
16
93
6
53
40
13
3
43
1.60
22316--22849
262
2.0
261
93
2
921
38
6
21
33
1.79
35985--36018
17
1.9
18
94
5
61
50
11
0
38
1.39
38808--38850
20
2.2
20
91
0
68
30
11
18
39
1.86
43167--43304
41
3.4
41
79
2
143
36
18
10
34
1.85
43231--43372
41
3.5
41
76
6
126
38
19
9
32
1.84
45111--45177
22
3.0
22
74
20
68
37
10
1
50
1.46

Tables:   1

The End!