Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006361.1 Hibiscus syriacus cultivar Beakdansim tig00015251_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52156

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
311--352
18
2.3
18
83
4
57
57
7
9
26
1.56
689--763
10
7.5
10
81
11
91
0
17
1
81
0.76
689--753
20
3.2
20
93
4
105
0
18
0
81
0.69
695--763
12
5.8
12
77
14
63
0
17
1
81
0.77
689--764
31
2.6
29
85
10
100
0
17
1
81
0.76
5217--5254
16
2.2
18
90
9
62
63
2
5
28
1.30
8481--8654
91
1.9
92
89
1
269
23
21
14
40
1.90
8235--8893
332
2.0
330
89
2
1018
25
19
17
37
1.93
9767--9827
8
7.5
8
73
10
52
8
14
1
75
1.11
9759--9830
33
2.2
32
83
9
92
6
16
1
75
1.10
20794--20831
17
2.2
18
86
9
53
60
2
5
31
1.33
21478--21538
13
4.7
13
83
0
77
27
16
18
37
1.92
21478--21545
26
2.6
26
90
0
100
27
17
16
38
1.91
21517--21674
85
1.9
85
89
0
244
31
19
16
32
1.94
32062--32447
182
2.1
185
89
2
584
45
8
3
41
1.51
34573--34618
23
2.0
23
87
8
67
2
28
0
69
1.00
39036--39208
90
1.9
89
94
1
301
44
6
10
38
1.66
40340--40383
22
2.2
20
84
15
56
27
34
11
27
1.91
40685--40747
26
2.3
29
81
8
69
19
7
1
71
1.19
46622--46664
20
2.2
19
83
8
50
30
25
13
30
1.94
51652--51696
22
2.0
23
83
12
58
48
2
2
46
1.26

Tables:   1

The End!