Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006375.1 Hibiscus syriacus cultivar Beakdansim tig00015338_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45355

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2123--2165
16
2.8
15
82
3
50
27
13
4
53
1.60
6549--6990
54
8.3
54
88
2
613
34
21
14
28
1.93
6558--6975
212
2.0
213
89
2
653
35
21
14
28
1.93
12321--12940
54
11.5
54
89
0
936
31
21
16
30
1.95
20837--20867
11
2.7
12
95
5
55
29
0
41
29
1.56
29463--29552
21
4.2
21
72
10
74
33
25
17
23
1.96
29446--29532
44
2.0
44
88
0
129
31
26
18
24
1.98
34518--34558
21
2.0
21
85
9
57
43
24
12
19
1.85
35026--35060
2
17.5
2
100
0
70
48
0
0
51
1.00
44112--44204
23
4.2
22
78
13
102
32
24
18
24
1.97
44199--44239
21
2.0
21
90
0
64
39
24
14
21
1.91

Tables:   1

The End!