Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006381.1 Hibiscus syriacus cultivar Beakdansim tig00015360_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58907

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
346--598
42
6.1
42
80
8
257
24
24
15
34
1.95
14722--14805
30
2.7
31
83
3
116
22
16
19
41
1.90
18438--18513
31
2.5
30
81
10
82
42
9
13
35
1.76
23511--23550
20
2.0
20
95
0
71
42
0
5
52
1.23
25893--25953
31
2.0
31
90
3
97
27
14
18
39
1.90
31869--32074
103
2.0
103
90
1
324
36
16
12
34
1.86
37930--38004
38
2.0
37
84
5
98
48
4
1
46
1.29
42478--42904
202
2.1
202
98
0
818
34
16
17
31
1.93
45553--45613
24
2.4
26
78
10
72
26
6
3
63
1.34
46053--46105
27
2.0
27
92
0
88
47
28
3
20
1.68
47456--47482
2
13.5
2
100
0
54
51
0
48
0
1.00
51758--51787
6
4.8
6
92
8
51
83
0
0
16
0.65

Tables:   1

The End!