Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006389.1 Hibiscus syriacus cultivar Beakdansim tig00015390_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56468

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
361--413
26
2.1
25
82
3
61
47
1
5
45
1.37
14076--14115
20
2.0
20
90
0
62
52
7
2
37
1.43
15668--15698
14
2.3
14
94
5
55
35
3
25
35
1.72
17332--17377
18
2.6
19
80
16
55
50
8
0
41
1.33
18408--19409
377
2.7
377
96
0
1844
39
17
10
32
1.83
20269--20453
31
6.0
31
95
1
318
38
22
18
20
1.93
21663--21694
2
16.0
2
100
0
64
50
0
0
50
1.00
23034--23078
21
2.0
22
87
8
65
42
2
4
51
1.34
27333--27385
19
3.1
17
76
12
54
28
1
1
67
1.11
32046--32095
27
1.9
26
84
15
68
32
4
4
60
1.34
39946--39977
16
2.0
16
93
0
55
65
0
3
31
1.08
44524--44565
15
2.7
15
92
3
66
4
4
23
66
1.30
44680--44777
2
49.0
2
100
0
196
50
0
0
50
1.00
50546--50570
11
2.3
11
100
0
50
16
0
52
32
1.44

Tables:   1

The End!