Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000639.1 Hibiscus syriacus cultivar Beakdansim tig00001238_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58440

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1723--1835
50
2.4
47
80
15
137
49
8
0
40
1.40
1795--1857
28
2.2
30
94
5
112
57
12
0
30
1.36
1799--1864
28
2.4
28
87
10
107
56
12
0
31
1.36
1834--1882
21
2.3
21
85
3
71
53
16
0
30
1.43
2339--2375
17
2.2
17
100
0
74
16
10
37
35
1.83
2482--2514
11
3.2
11
83
16
52
24
48
9
18
1.76
2476--2514
20
2.0
20
100
0
78
25
48
10
15
1.76
2493--2556
31
2.1
31
96
0
119
18
43
12
25
1.85
21871--21909
19
2.1
19
85
0
51
38
0
5
56
1.22
22793--22874
29
2.8
29
90
1
128
32
15
9
41
1.80
24163--24192
15
2.0
15
93
0
51
56
23
0
20
1.42
27559--27640
29
2.8
29
94
1
137
34
14
8
42
1.76
29279--32755
513
6.8
512
86
3
4359
36
16
18
29
1.92
45971--46017
17
2.8
17
93
0
76
25
6
29
38
1.81
49347--49436
5
17.6
5
91
4
90
40
8
0
51
1.33
49347--49587
10
24.3
10
91
3
173
35
14
4
45
1.65
49347--49587
15
15.9
15
86
4
205
35
14
4
45
1.65
49388--49587
5
39.8
5
91
1
265
35
18
5
42
1.72
49697--49739
18
2.4
18
84
0
59
27
34
27
9
1.88

Tables:   1

The End!