Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006393.1 Hibiscus syriacus cultivar Beakdansim tig00015402_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57464

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14036--14141
31
3.4
31
98
0
203
26
14
23
35
1.93
20857--20904
23
2.1
23
100
0
96
35
4
29
31
1.76
21666--21693
2
14.0
2
100
0
56
50
0
0
50
1.00
21892--21954
29
2.1
30
85
5
83
39
15
6
38
1.73
23004--23072
31
2.3
31
79
2
86
40
7
8
43
1.63
23847--24091
122
2.0
122
97
0
463
22
20
17
39
1.93
24233--24311
3
25.0
3
75
19
63
63
2
1
32
1.16
35670--35700
5
6.2
5
100
0
62
0
19
38
41
1.51
39833--39927
29
3.2
28
81
10
100
45
7
6
41
1.57
43660--43693
16
2.1
16
88
0
50
58
0
20
20
1.39
43781--43837
29
2.0
29
100
0
114
47
7
10
35
1.65
43811--43943
60
2.2
60
83
0
158
32
10
15
41
1.82
48040--48083
22
2.0
22
100
0
88
27
27
9
36
1.87
51545--51579
2
17.5
2
100
0
70
51
0
48
0
1.00
54139--54169
11
2.9
11
95
4
55
0
25
58
16
1.38
54397--54442
24
2.0
23
91
4
74
39
2
0
58
1.10

Tables:   1

The End!