Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006397.1 Hibiscus syriacus cultivar Beakdansim tig00015410_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  80981

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3104--3151
12
4.1
12
72
5
53
47
2
0
50
1.12
3084--3154
35
2.0
36
91
2
117
46
5
0
47
1.26
3317--3362
22
2.1
22
83
0
56
36
0
6
56
1.25
3525--3555
14
2.2
14
94
0
53
48
6
19
25
1.72
8871--8925
28
2.0
28
85
0
74
32
12
21
32
1.91
10385--10415
2
15.5
2
100
0
62
51
0
48
0
1.00
17392--17482
42
2.2
42
84
2
112
32
6
16
43
1.74
18439--18606
43
4.0
41
84
6
178
22
19
5
52
1.67
18442--18606
44
3.9
43
84
6
185
22
19
5
52
1.66
20316--20348
3
11.0
3
100
0
66
66
0
33
0
0.92
23531--23630
50
2.0
51
90
2
157
17
17
13
53
1.74
25396--25505
55
2.0
54
87
1
157
41
6
11
40
1.67
33182--33216
18
1.9
18
100
0
70
11
34
37
17
1.85
49783--49887
23
4.6
23
90
7
160
28
22
26
21
1.99
50927--50979
2
27.0
2
92
3
90
50
1
0
47
1.12
63552--63586
3
11.7
3
100
0
70
0
31
0
68
0.90
72500--72545
2
23.0
2
100
0
92
50
0
0
50
1.00

Tables:   1

The End!